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用新型奥沙利铂衍生物标记赫赛汀:一种针对选择性药物递送的计算方法。

Labelling Herceptin with a novel oxaliplatin derivative: a computational approach towards the selective drug delivery.

机构信息

Departamento de Química Física, Facultad de Química, Universidad de Murcia, 30100 Campus de Espinardo, Murcia, Spain,

出版信息

J Mol Model. 2014 Sep;20(9):2401. doi: 10.1007/s00894-014-2401-7. Epub 2014 Aug 23.

Abstract

The clinical use of platinum(II)-based drugs has serious side effects due to the non-specific reactions with both malignant and normal cells. To circumvent such major drawback, novel metallodrugs might be combined with suitable carrier molecules, as antibodies, to ensure selective attacks on tumours while sparing healthy tissues. In this contribution, we investigate the stability of a novel oxaliplatin derivate drug embedded in Herceptin (trastuzumab), an antibody which is able to recognise breast cancer cells, by using a wide panel of theoretical tools: docking, molecular dynamics and quantum calculations. Our calculations reveal the binding mechanism: the drug initially interacts non-covalently with the Pro40A and Asp167A residues, and the nitrogen of His171B subsequently replaces one of the water molecules coordinated to the platinum center, where the latter step reversibly fixes the drug into the antibody. These data might be used to further rationalise the synthesis of improved drugs beyond classical platinum(II) derivatives by improving the ligand-protein coupling mode.

摘要

由于与恶性和正常细胞的非特异性反应,基于铂(II)的药物的临床应用具有严重的副作用。为了避免这种主要的缺点,可以将新型金属药物与合适的载体分子(如抗体)结合,以确保对肿瘤的选择性攻击,同时保护健康组织。在本研究中,我们使用广泛的理论工具(对接、分子动力学和量子计算)研究了嵌入曲妥珠单抗(一种能够识别乳腺癌细胞的抗体)中的新型奥沙利铂衍生物药物的稳定性。我们的计算揭示了结合机制:药物最初与 Pro40A 和 Asp167A 残基非共价相互作用,随后氮原子取代与铂中心配位的一个水分子,其中后一步可逆地将药物固定在抗体中。这些数据可用于通过改进配体-蛋白偶联模式来进一步合理化除经典铂(II)衍生物以外的改进药物的合成。

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