Feng Shiliang, Zhu Weiping
Shanghai Institute of Applied Mathematics and Mechanics, Shanghai university, 149 Yanchang Road, Shanghai, PR China.
Shanghai Institute of Applied Mathematics and Mechanics, Shanghai university, 149 Yanchang Road, Shanghai, PR China.
J Theor Biol. 2014 Dec 21;363:235-46. doi: 10.1016/j.jtbi.2014.08.033. Epub 2014 Aug 27.
Chemotacting eukaryotic cells can sense shallow gradients of chemoattractants and respond by assuming an asymmetric shape with well-defined front and back regions. Such a striking polarization phenomenon is produced largely through the interconversions and interactions between several cellular components, including Rac GTPase (Rac), phosphoinositide 3-kinase (PI3K), tensin homology protein (PTEN), phosphatidylinositol 3,4,5-trisphosphate (PI(3,4,5)P3) and phosphatidylinositol (4,5)-bisphosphate (PI(4,5)P2). Here, we developed a mathematical model of cell polarization by exploring bidirectional molecular transport that arose from phosphoinositides (PIs) and Rac-mediated feedback loops. We assumed a static gradient of activated Rac derived from an external signal field as the internal trigger signal. The evolution of PI(3,4,5)P3 and PI(4,5)P2 along with PI3K and PTEN that act as activator and inhibitor, respectively, were described by a pair of coupled transient reaction-diffusion equations. The entire system was solved using a Lattice-Boltzmann method with an embedded Monte-Carlo method to track the stochastic translocation behaviors of discrete PI3K/PTEN molecules. We first showed that, upon a graded external stimulus, the Rac to PI(3,4,5)P3 cascade exhibited a short range positive-feedback loop, while the PTEN to PI(4,5)P2 cascade contributed another long range negative-feedback loop, which dominated the "forward" and "backward" molecular transport, respectively. Second, polarization was governed by the ratio of [PI3K] to [PTEN], and manifested a switch-like behavior. Third, with a uniform stimulus, spontaneous polarization could occur in PTEN-deficient cells.
趋化真核细胞能够感知趋化因子的浅梯度,并通过呈现具有明确前后区域的不对称形状做出反应。这种显著的极化现象很大程度上是通过几种细胞成分之间的相互转化和相互作用产生的,这些成分包括Rac鸟苷三磷酸酶(Rac)、磷酸肌醇3激酶(PI3K)、张力蛋白同源蛋白(PTEN)、磷脂酰肌醇3,4,5-三磷酸(PI(3,4,5)P3)和磷脂酰肌醇(4,5)-二磷酸(PI(4,5)P2)。在这里,我们通过探索由磷酸肌醇(PIs)和Rac介导的反馈回路产生的双向分子运输,建立了细胞极化的数学模型。我们假设源自外部信号场的活化Rac的静态梯度作为内部触发信号。PI(3,4,5)P3和PI(4,5)P2与分别作为激活剂和抑制剂的PI3K和PTEN的演化,由一对耦合的瞬态反应扩散方程描述。使用格子玻尔兹曼方法并结合蒙特卡罗方法求解整个系统,以跟踪离散PI3K/PTEN分子的随机易位行为。我们首先表明,在分级外部刺激下,Rac到PI(3,4,5)P3级联表现出短程正反馈回路,而PTEN到PI(4,5)P2级联贡献了另一个长程负反馈回路,它们分别主导“向前”和“向后”分子运输。其次,极化由[PI3K]与[PTEN]的比率控制,并表现出开关样行为。第三,在均匀刺激下,PTEN缺陷细胞中可能发生自发极化。