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北极海罕见β变形菌的冬季绽放。

Winter bloom of a rare betaproteobacterium in the Arctic Ocean.

机构信息

Limnology and Science for Life Laboratory, Department of Ecology and Genetics, Uppsala University Uppsala, Sweden.

Limnological Station, Institute of Plant Biology, University of Zurich Kilchberg, Switzerland.

出版信息

Front Microbiol. 2014 Aug 20;5:425. doi: 10.3389/fmicb.2014.00425. eCollection 2014.

Abstract

Extremely low abundance microorganisms (members of the "rare biosphere") are believed to include dormant taxa, which can sporadically become abundant following environmental triggers. Yet, microbial transitions from rare to abundant have seldom been captured in situ, and it is uncertain how widespread these transitions are. A bloom of a single ribotype (≥99% similarity in the 16S ribosomal RNA gene) of a widespread betaproteobacterium (Janthinobacterium sp.) occurred over 2 weeks in Arctic marine waters. The Janthinobacterium population was not detected microscopically in situ in January and early February, but suddenly appeared in the water column thereafter, eventually accounting for up to 20% of bacterial cells in mid February. During the bloom, this bacterium was detected at open water sites up to 50 km apart, being abundant down to more than 300 m. This event is one of the largest monospecific bacterial blooms reported in polar oceans. It is also remarkable because Betaproteobacteria are typically found only in low abundance in marine environments. In particular, Janthinobacterium were known from non-marine habitats and had previously been detected only in the rare biosphere of seawater samples, including the polar oceans. The Arctic Janthinobacterium formed mucilagenous monolayer aggregates after short (ca. 8 h) incubations, suggesting that biofilm formation may play a role in maintaining rare bacteria in pelagic marine environments. The spontaneous mass occurrence of this opportunistic rare taxon in polar waters during the energy-limited season extends current knowledge of how and when microbial transitions between rare and abundant occur in the ocean.

摘要

极度低丰度微生物(“稀有生物圈”的成员)被认为包括休眠分类群,它们可以在环境触发后偶尔变得丰富。然而,微生物从稀有到丰富的转变很少在现场捕获,也不确定这些转变有多普遍。一种广泛的β变形菌(16S 核糖体 RNA 基因相似度≥99%)的单一菌型(ribotype)在北极海洋水中发生了两周的爆发。在 1 月和 2 月初,Janthinobacterium 种群在现场未被显微镜检测到,但此后突然出现在水柱中,最终在 2 月中旬占细菌细胞的 20%。在爆发期间,这种细菌在相隔 50 公里的开阔水域地点被检测到,在 300 米以上的深度也很丰富。这一事件是极地海洋中报道的最大的单种细菌爆发之一。它也很引人注目,因为β变形菌通常在海洋环境中只以低丰度存在。特别是,Janthinobacterium 来自非海洋生境,以前只在海洋水样的稀有生物圈中,包括极地海洋中被检测到。北极 Janthinobacterium 在短时间(约 8 小时)孵育后形成黏液单层聚集,这表明生物膜形成可能在维持海洋浮游环境中的稀有细菌方面发挥作用。在能量有限的季节,这种机会主义稀有分类群在极地水域中的自发大量出现,扩展了当前关于海洋中稀有和丰富微生物之间的转变是如何以及何时发生的知识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e859/4138443/cab125e50547/fmicb-05-00425-g0001.jpg

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