Trivedi Ram Narayan, Akhtar Parvez, Meade Jonathan, Bartlow Patrick, Ataai Mohammad M, Khan Saleem A, Domach Michael M
Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.
Appl Environ Microbiol. 2014 Dec;80(23):7154-60. doi: 10.1128/AEM.02445-14. Epub 2014 Sep 12.
For small-copy-number pUC-type plasmids, the inc1 and inc2 mutations, which deregulate replication, were previously found to increase the plasmid copy number 6- to 7-fold. Because plasmids can exert a growth burden, it was not clear if further amplification of copy number would occur due to inc mutations when the starting point for plasmid copy number was orders of magnitude higher. To investigate further the effects of the inc mutations and the possible limits of plasmid synthesis, the parent plasmid pNTC8485 was used as a starting point. It lacks an antibiotic resistance gene and has a copy number of ~1,200 per chromosome. During early stationary-phase growth in LB broth at 37°C, inc2 mutants of pNTC8485 exhibited a copy number of ~7,000 per chromosome. In minimal medium at late log growth, the copy number was found to be significantly increased, to approximately 15,000. In an attempt to further increase the plasmid titer (plasmid mass/culture volume), enzymatic hydrolysis of the selection agent, sucrose, at late log growth extended growth and tripled the total plasmid amount such that an approximately 80-fold gain in total plasmid was obtained compared to the value for typical pUC-type vectors. Finally, when grown in minimal medium, no detectable impact on the exponential growth rate or the fidelity of genomic or plasmid DNA replication was found in cells with deregulated plasmid replication. The use of inc mutations and the sucrose degradation method presents a simplified way for attaining high titers of plasmid DNA for various applications.
对于低拷贝数的pUC型质粒,之前发现解除复制调控的inc1和inc2突变可使质粒拷贝数增加6至7倍。由于质粒会带来生长负担,所以当质粒拷贝数的起始点高出几个数量级时,尚不清楚inc突变是否会导致拷贝数进一步增加。为了进一步研究inc突变的影响以及质粒合成的可能限度,以亲本质粒pNTC8485作为起始材料。它缺乏抗生素抗性基因,每个染色体的拷贝数约为1200。在37°C的LB肉汤中进行早期稳定期生长时,pNTC8485的inc2突变体每个染色体的拷贝数约为7000。在对数生长后期的基本培养基中,发现拷贝数显著增加,达到约15000。为了进一步提高质粒滴度(质粒质量/培养物体积),在对数生长后期对选择剂蔗糖进行酶解,延长了生长时间,并使总质粒量增加了两倍,因此与典型pUC型载体的值相比,总质粒获得了约80倍的增加。最后,当在基本培养基中生长时,在质粒复制失调的细胞中未发现对指数生长速率或基因组或质粒DNA复制保真度有可检测到的影响。使用inc突变和蔗糖降解方法为获得用于各种应用的高滴度质粒DNA提供了一种简化方法。