Emmenegger Eveline J, Glenn Jolene A, Winton James R, Batts William N, Gregg Jacob L, Hershberger Paul K
U.S. Geological Survey, Western Fisheries Research Center (WFRC), 6505 NE 65th St., Seattle, WA 98115, USA.
U.S. Geological Survey, Western Fisheries Research Center (WFRC), 6505 NE 65th St., Seattle, WA 98115, USA.
Vet Microbiol. 2014 Nov 7;174(1-2):16-26. doi: 10.1016/j.vetmic.2014.08.028. Epub 2014 Sep 16.
Viral erythrocytic necrosis (VEN) is a condition affecting the red blood cells of more than 20 species of marine and anadromous fishes in the North Atlantic and North Pacific Oceans. Among populations of Pacific herring (Clupea pallasii) on the west coast of North America the disease causes anemia and elevated mortality in periodic epizootics. Presently, VEN is diagnosed by observation of typical cytoplasmic inclusion bodies in stained blood smears from infected fish. The causative agent, erythrocytic necrosis virus (ENV), is unculturable and a presumed iridovirus by electron microscopy. In vivo amplification of the virus in pathogen-free laboratory stocks of Pacific herring with subsequent virus concentration, purification, DNA extraction, and high-throughput sequencing were used to obtain genomic ENV sequences. Fragments with the highest sequence identity to the family Iridoviridae were used to design four sets of ENV-specific polymerase chain reaction (PCR) primers. Testing of blood and tissue samples from experimentally and wild infected Pacific herring as well as DNA extracted from other amphibian and piscine iridoviruses verified the assays were specific to ENV with a limit of detection of 0.0003 ng. Preliminary phylogenetic analyses of a 1448 bp fragment of the putative DNA polymerase gene supported inclusion of ENV in a proposed sixth genus of the family Iridoviridae that contains other erythrocytic viruses from ectothermic hosts. This study provides the first molecular evidence of ENV's inclusion within the Iridoviridae family and offers conventional PCR assays as a means of rapidly surveying the ENV-status of wild and propagated Pacific herring stocks.
病毒性红细胞坏死(VEN)是一种影响北大西洋和北太平洋20多种海洋和溯河产卵鱼类红细胞的疾病。在北美洲西海岸的太平洋鲱鱼(Clupea pallasii)种群中,这种疾病在周期性的 epizootics 中会导致贫血和死亡率升高。目前,VEN 通过观察感染鱼的染色血涂片上典型的细胞质包涵体来诊断。病原体红细胞坏死病毒(ENV)无法培养,通过电子显微镜观察推测为虹彩病毒。利用太平洋鲱鱼无病原体实验室种群中病毒的体内扩增,随后进行病毒浓缩、纯化、DNA 提取和高通量测序,以获得 ENV 的基因组序列。与虹彩病毒科具有最高序列同一性的片段被用于设计四组 ENV 特异性聚合酶链反应(PCR)引物。对来自实验感染和野生感染的太平洋鲱鱼的血液和组织样本以及从其他两栖类和鱼类虹彩病毒中提取的 DNA 进行检测,验证了该检测方法对 ENV 具有特异性,检测限为 0.0003 ng。对假定的 DNA 聚合酶基因的 1448 bp 片段进行的初步系统发育分析支持将 ENV 纳入虹彩病毒科拟议的第六个属,该属包含来自变温宿主的其他红细胞病毒。这项研究提供了 ENV 属于虹彩病毒科的首个分子证据,并提供了常规 PCR 检测方法,作为快速检测野生和养殖太平洋鲱鱼种群 ENV 状态的一种手段。