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用于医院感染细菌检测的一步法种特异性高分辨率熔解分析

One-step species-specific high resolution melting analysis for nosocomial bacteria detection.

作者信息

Wong Yeng Pooi, Chua Kek Heng, Thong Kwai Lin

机构信息

Microbiology Unit, Institute of Biological Science, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.

出版信息

J Microbiol Methods. 2014 Dec;107:133-7. doi: 10.1016/j.mimet.2014.10.001.

Abstract

Nosocomial infections are a major public health concern worldwide. Early and accurate identification of nosocomial pathogens which are often multidrug resistant is crucial for prompt treatment. Hence, an alternative real-time polymerase chain reaction coupled with high resolution melting-curve analysis (HRMA) was developed for identification of five nosocomial bacteria. This assay targets species-specific regions of each nosocomial bacteria and produced five distinct melt curves with each representing a particular bacterial species. The melting curves were characterized by peaks of 78.8 ± 0.2 °C for Acinetobacter baumannii, 82.7 ± 0.2 °C for Escherichia coli, 86.3 ± 0.3 °C for Klebsiella pneumoniae, 88.8 ± 0.2 °C for Pseudomonas aeruginosa and 74.6 ± 02 °C for methicillin-resistant Staphylococcus aureus. The assay was able to specifically detect the five bacterial species with an overall detection limit of 2 × 10(-2) ng/μL. In conclusion, the HRM assay developed is a simple and rapid method for identification of the selected nosocomial pathogens.

摘要

医院感染是全球主要的公共卫生问题。早期准确识别通常具有多重耐药性的医院病原体对于及时治疗至关重要。因此,开发了一种结合高分辨率熔解曲线分析(HRMA)的替代实时聚合酶链反应,用于鉴定五种医院细菌。该检测针对每种医院细菌的物种特异性区域,产生五条不同的熔解曲线,每条曲线代表一种特定的细菌物种。鲍曼不动杆菌的熔解曲线特征峰为78.8±0.2℃,大肠杆菌为82.7±0.2℃,肺炎克雷伯菌为86.3±0.3℃,铜绿假单胞菌为88.8±0.2℃,耐甲氧西林金黄色葡萄球菌为74.6±0.2℃。该检测能够特异性检测这五种细菌物种,总体检测限为2×10(-2)ng/μL。总之,所开发的HRM检测是一种简单快速的方法,用于鉴定所选的医院病原体。

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