Suppr超能文献

重折叠时初始未折叠状态的结构特征决定了在渗透压剂存在下折叠蛋白的催化效率。

Structural characteristic of the initial unfolded state on refolding determines catalytic efficiency of the folded protein in presence of osmolytes.

作者信息

Warepam Marina, Sharma Gurumayum Suraj, Dar Tanveer Ali, Khan Md Khurshid Alam, Singh Laishram Rajendrakumar

机构信息

Dr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, India.

Department of Clinical Biochemistry, University of Kashmir, Srinagar, Jammu & Kashmir, India.

出版信息

PLoS One. 2014 Oct 14;9(10):e109408. doi: 10.1371/journal.pone.0109408. eCollection 2014.

Abstract

Osmolytes are low molecular weight organic molecules accumulated by organisms to assist proper protein folding, and to provide protection to the structural integrity of proteins under denaturing stress conditions. It is known that osmolyte-induced protein folding is brought by unfavorable interaction of osmolytes with the denatured/unfolded states. The interaction of osmolyte with the native state does not significantly contribute to the osmolyte-induced protein folding. We have therefore investigated if different denatured states of a protein (generated by different denaturing agents) interact differently with the osmolytes to induce protein folding. We observed that osmolyte-assisted refolding of protein obtained from heat-induced denatured state produces native molecules with higher enzyme activity than those initiated from GdmCl- or urea-induced denatured state indicating that the structural property of the initial denatured state during refolding by osmolytes determines the catalytic efficiency of the folded protein molecule. These conclusions have been reached from the systematic measurements of enzymatic kinetic parameters (Km and kcat), thermodynamic stability (Tm and ΔHm) and secondary and tertiary structures of the folded native proteins obtained from refolding of various denatured states (due to heat-, urea- and GdmCl-induced denaturation) of RNase-A in the presence of various osmolytes.

摘要

渗透溶质是生物体积累的低分子量有机分子,用于辅助蛋白质正确折叠,并在变性应激条件下保护蛋白质的结构完整性。已知渗透溶质诱导的蛋白质折叠是由渗透溶质与变性/未折叠状态的不利相互作用引起的。渗透溶质与天然状态的相互作用对渗透溶质诱导的蛋白质折叠没有显著贡献。因此,我们研究了蛋白质的不同变性状态(由不同变性剂产生)与渗透溶质相互作用以诱导蛋白质折叠的方式是否不同。我们观察到,从热诱导变性状态获得的蛋白质在渗透溶质辅助下重折叠产生的天然分子比从盐酸胍或尿素诱导变性状态起始重折叠产生的天然分子具有更高的酶活性,这表明在渗透溶质重折叠过程中初始变性状态的结构性质决定了折叠后蛋白质分子的催化效率。这些结论是通过系统测量各种变性状态(由于热、尿素和盐酸胍诱导变性)的核糖核酸酶A在各种渗透溶质存在下重折叠得到的折叠天然蛋白质的酶动力学参数(Km和kcat)、热力学稳定性(Tm和ΔHm)以及二级和三级结构而得出的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f15/4196897/16e952f3edbd/pone.0109408.g001.jpg

相似文献

2
Cooperative Unfolding of Residual Structure in Heat Denatured Proteins by Urea and Guanidinium Chloride.
PLoS One. 2015 Jun 5;10(6):e0128740. doi: 10.1371/journal.pone.0128740. eCollection 2015.
3
Osmolyte mixtures have different effects than individual osmolytes on protein folding and functional activity.
Arch Biochem Biophys. 2015 May 1;573:77-83. doi: 10.1016/j.abb.2015.03.017. Epub 2015 Mar 26.
4
Polyols Have Unique Ability to Refold Protein as Compared to Other Osmolyte Types.
Biochemistry (Mosc). 2017 Apr;82(4):465-473. doi: 10.1134/S0006297917040083.
6
Osmolyte-induced protein folding free energy changes.
Proteins. 2006 May 1;63(2):290-6. doi: 10.1002/prot.20868.
8
Osmolytes induce structure in an early intermediate on the folding pathway of barstar.
J Biol Chem. 2004 Sep 24;279(39):40303-13. doi: 10.1074/jbc.M406323200. Epub 2004 Jul 17.
9
Polyol osmolytes stabilize native-like cooperative intermediate state of yeast hexokinase A at low pH.
Biochimie. 2012 Apr;94(4):947-52. doi: 10.1016/j.biochi.2011.12.012. Epub 2011 Dec 19.

本文引用的文献

1
Manifestations of native topology in the denatured state ensemble of Rhodopseudomonas palustris cytochrome c'.
Biochemistry. 2011 Feb 15;50(6):1029-41. doi: 10.1021/bi101551h. Epub 2011 Jan 20.
4
Effects of cell volume regulating osmolytes on glycerol 3-phosphate binding to triosephosphate isomerase.
Biochemistry. 2007 Sep 4;46(35):10055-62. doi: 10.1021/bi700990d. Epub 2007 Aug 15.
5
Chemical chaperone rescue of mutant human cystathionine beta-synthase.
Mol Genet Metab. 2007 Aug;91(4):335-42. doi: 10.1016/j.ymgme.2007.04.011. Epub 2007 May 30.
8
A novel therapeutic strategy for polyglutamine diseases by stabilizing aggregation-prone proteins with small molecules.
J Mol Med (Berl). 2005 May;83(5):343-52. doi: 10.1007/s00109-004-0632-2. Epub 2005 Mar 10.
9
Osmolyte-induced folding enhances tryptic enzyme activity.
Arch Biochem Biophys. 2005 Apr 1;436(1):78-82. doi: 10.1016/j.abb.2005.01.008.
10
Compatible and counteracting solutes: protecting cells from the Dead Sea to the deep sea.
Sci Prog. 2004;87(Pt 1):1-24. doi: 10.3184/003685004783238599.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验