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两种天然产物三氯辛和红菌素的傅里叶变换红外光谱、分子内C-H⋯O相互作用、最高占据分子轨道、最低未占据分子轨道、分子静电势分析及生物活性:密度泛函理论和量子拓扑原子理论方法

FT-IR spectroscopy, intra-molecular C-H⋯O interactions, HOMO, LUMO, MESP analysis and biological activity of two natural products, triclisine and rufescine: DFT and QTAIM approaches.

作者信息

Srivastava Ambrish Kumar, Pandey Anoop Kumar, Jain Sudha, Misra Neeraj

机构信息

Department of Physics, University of Lucknow, Lucknow, Uttar Pradesh 226007, India.

Department of Physics, Govt. D.P.G. College, Dantewada, Chhattisgarh 494449, India.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2015 Feb 5;136 Pt B:682-9. doi: 10.1016/j.saa.2014.09.082. Epub 2014 Sep 30.

Abstract

The present study deals with two natural products, triclisine and rufescine which are extracted from the Amazonian wines but ubiquitous in nature. The quantum chemical density functional method at B3PW91/6-311+G(d,p) level is used to obtain the equilibrium geometries of these molecules. The quantum theory of atoms-in-molecule approach is employed to study various intra-molecular C-H⋯O interactions within these molecules. We have also performed vibrational analyses of triclisine and rufescine at their equilibrium geometries and presented the complete assignments of the significant vibrational modes. The calculated vibrational frequencies are shown to be in perfect agreement with the experimentally observed FTIR spectra of molecules under study. In addition, the electronic properties of these molecules are also discussed with the help of HOMO-LUMO and MESP surfaces and a number of electronic as well as thermodynamic parameters are calculated which are closely related to their chemical reactivity and reaction paths. The biological activities of both molecules have also been predicted which highlight their pharmacological importance.

摘要

本研究涉及两种天然产物,即从亚马逊葡萄酒中提取但在自然界中普遍存在的三氯辛和鲁非辛。采用B3PW91/6-311+G(d,p)水平的量子化学密度泛函方法来获得这些分子的平衡几何结构。运用分子中的原子量子理论来研究这些分子内各种分子内C-H⋯O相互作用。我们还在三氯辛和鲁非辛的平衡几何结构下进行了振动分析,并给出了重要振动模式的完整归属。计算得到的振动频率与所研究分子的实验观测FTIR光谱完全吻合。此外,借助HOMO-LUMO和MESP表面对这些分子的电子性质进行了讨论,并计算了一些与它们的化学反应性和反应路径密切相关的电子以及热力学参数。还预测了这两种分子的生物活性,突出了它们的药理学重要性。

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