Saxton Michael J
Department of Biochemistry and Molecular Medicine, University of California , One Shields Ave., Davis, California 95616, United States.
J Phys Chem B. 2014 Nov 13;118(45):12805-17. doi: 10.1021/jp5059885. Epub 2014 Nov 3.
Scalable tracers are potentially a useful tool to examine diffusion mechanisms and to predict diffusion coefficients, particularly for hindered diffusion in complex, heterogeneous, or crowded systems. Scalable tracers are defined as a series of tracers varying in size but with the same shape, structure, surface chemistry, deformability, and diffusion mechanism. Both chemical homology and constant dynamics are required. In particular, branching must not vary with size, and there must be no transition between ordinary diffusion and reptation. Measurements using scalable tracers yield the mean diffusion coefficient as a function of size alone; measurements using nonscalable tracers yield the variation due to differences in the other properties. Candidate scalable tracers are discussed for two-dimensional (2D) diffusion in membranes and three-dimensional diffusion in aqueous solutions. Correlations to predict the mean diffusion coefficient of globular biomolecules from molecular mass are reviewed briefly. Specific suggestions for the 3D case include the use of synthetic dendrimers or random hyperbranched polymers instead of dextran and the use of core-shell quantum dots. Another useful tool would be a series of scalable tracers varying in deformability alone, prepared by varying the density of crosslinking in a polymer to make say "reinforced Ficoll" or "reinforced hyperbranched polyglycerol."
可扩展示踪剂有可能成为一种有用的工具,用于研究扩散机制和预测扩散系数,特别是对于复杂、非均相或拥挤系统中的受阻扩散。可扩展示踪剂被定义为一系列大小不同但形状、结构、表面化学、可变形性和扩散机制相同的示踪剂。化学同源性和恒定动力学都是必需的。特别是,支化不能随大小变化,并且在普通扩散和蛇形运动之间不能有转变。使用可扩展示踪剂的测量仅产生平均扩散系数作为大小的函数;使用不可扩展示踪剂的测量产生由于其他性质差异导致的变化。讨论了用于膜中二维(2D)扩散和水溶液中三维扩散的候选可扩展示踪剂。简要回顾了根据分子量预测球状生物分子平均扩散系数的相关性。三维情况的具体建议包括使用合成树枝状大分子或无规超支化聚合物代替葡聚糖,以及使用核壳量子点。另一个有用的工具将是一系列仅可变形性不同的可扩展示踪剂,通过改变聚合物中的交联密度来制备,例如制成“增强型菲可”或“增强型超支化聚甘油”。