Simões Maria José, Lobo Conceição, Egas Conceição, Nunes Sandrina, Carmona Susana, Costa Miguel Ângelo, Duarte Tânia, Ribeiro Luísa, Faro Carlos, Cunha-Vaz José G
Genoinseq, Next Generation Sequencing Unit, Biocant, Cantanhede, Portugal.
Ophthalmologica. 2014;232(3):156-62. doi: 10.1159/000365229. Epub 2014 Oct 10.
To explore phenotype-genotype correlations that may contribute to a better understanding of diabetic retinopathy (DR).
An exploratory association study was performed to identify genetic variants associated with non-proliferative DR (NPDR) in 307 type 2 diabetic patients who were previously stratified into 3 different phenotypes of NPDR progression. The 307 patients were genotyped for 174 single nucleotide polymorphisms of 11 candidate genes (ACE, AGER, AKR1B1, ICAM1, MTHFR, NOS1, NOS3, PPARGC1A, TGFB1, TNF and VEGFA).
Significant associations were observed for PPARGC1A rs16874120 with phenotype A (odds ratio, OR = 0.60, 95% confidence interval, CI 0.36-0.99), ICAM1 rs1801714 with phenotype B (OR = 3.32, 95% CI 1.05-10.50) and both PPARGC1A rs10213440 (OR = 2.00, 95% CI 1.07-3.73) and MTHFR rs1801133 (OR = 1.84, 95% CI 1.08-3.11) with phenotype C.
RESULTS indicate that specific gene variants in ICAM1, PPARGC1A and MTHFR are associated with different NPDR phenotypes, being likely candidates to explain different disease mechanisms underlying the different phenotypes. This is the first study to show correlations between specific gene variants and NPDR phenotypes, opening new perspectives on DR.
探索可能有助于更好地理解糖尿病视网膜病变(DR)的表型-基因型相关性。
进行了一项探索性关联研究,以确定307例2型糖尿病患者中与非增殖性DR(NPDR)相关的基因变异,这些患者先前被分为NPDR进展的3种不同表型。对307例患者的11个候选基因(ACE、AGER、AKR1B1、ICAM1、MTHFR、NOS1、NOS3、PPARGC1A、TGFB1、TNF和VEGFA)的174个单核苷酸多态性进行基因分型。
观察到PPARGC1A rs16874120与表型A显著相关(优势比,OR = 0.60,95%置信区间,CI 0.36 - 0.99),ICAM1 rs1801714与表型B显著相关(OR = 3.32,95% CI 1.05 - 10.50),PPARGC1A rs10213440(OR = 2.00,95% CI 1.07 - 3.73)和MTHFR rs1801133(OR = 1.84,95% CI 1.08 - 3.11)均与表型C显著相关。
结果表明,ICAM1、PPARGC1A和MTHFR中的特定基因变异与不同的NPDR表型相关,可能是解释不同表型背后不同疾病机制的候选因素。这是第一项显示特定基因变异与NPDR表型之间相关性的研究,为DR开辟了新的视角。