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条纹锯脂鲤(脂鲤目,锯脂鲤科)的完整线粒体基因组序列

Complete mitochondrial genome sequence of Prochilodus lineatus (Characiformes, Prochilodontidae).

作者信息

do Carmo Anderson Oliveira, Brandão Dias Pedro Ferreira Pinto, Martins Ana Paula Vimieiro, Bedore Alessandra Gomes, Kalapothakis Evanguedes

机构信息

a Departamento de Biologia Geral , Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos , Pampulha , Belo Horizonte , MG , Brasil and.

b Companhia Energética de Minas Gerais S/A, CEMIG. Estação Ambiental Volta Grande , Conceição das Alagoas , MG , Brasil.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):1946-7. doi: 10.3109/19401736.2014.971300. Epub 2014 Oct 20.

DOI:10.3109/19401736.2014.971300
PMID:25329266
Abstract

Prochilodus lineatus (curimba) is an important Brazilian freshwater migratory fish with substantial economic importance in fishing. The complete mitochondrial genome of P. lineatus is 16,699 bp and contains 13 protein-coding genes (PCGs), 2 rRNA genes, 22 tRNA genes and one control region (D-loop). The mtDNA of P. lineatus is the first mitogenome of the Prochilodontidae family to be fully characterized. All of the PCGs in the mtDNA use the standard ATG start codon, with the exception of Cox1 that utilizes the GTG start codon. Six of the 13 PCGs contain TAA stop codons, two contain the incomplete stop codon TA- (Atp6 and Nd6), and five contain the incomplete stop codon T- - (Nd2, Cox2, Nd3, Nd4 and Cytb).

摘要

细纹锯脂鲤(curimba)是一种重要的巴西淡水洄游鱼类,在渔业中具有重大经济价值。细纹锯脂鲤的完整线粒体基因组为16,699 bp,包含13个蛋白质编码基因(PCGs)、2个rRNA基因、22个tRNA基因和一个控制区(D-loop)。细纹锯脂鲤的线粒体DNA是锯脂鲤科第一个被完全表征的线粒体基因组。线粒体DNA中的所有PCGs均使用标准的ATG起始密码子,但细胞色素氧化酶亚基1(Cox1)使用GTG起始密码子。13个PCGs中有6个含有TAA终止密码子,2个含有不完全终止密码子TA-(ATP合酶亚基6和NADH脱氢酶亚基6),5个含有不完全终止密码子T--(NADH脱氢酶亚基2、细胞色素氧化酶亚基2、NADH脱氢酶亚基3、NADH脱氢酶亚基4和细胞色素b)。

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