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枯草芽孢杆菌ribT基因的可能功能:理论预测、克隆与表达

Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression.

作者信息

Yakimov A P, Seregina T A, Kholodnyak A A, Kreneva R A, Mironov A S, Perumov D A, Timkovskii A L

机构信息

B.P. Konstantinov Petersburg Nuclear Physics Institute, National Research Center "Kurchatov Institute", Orlova Roshcha, Gatchina, Leningrad Region, Russia, 188300 ; St. Petersburg State Polytechnical University, Polytechnicheskaya Str., 29, St. Petersburg, Russia, 195251.

State Research Institute of Genetics and Selection of Industrial Microorganisms, 1st Dorozhnyi Proezd, 1, Moscow, Russia, 117545.

出版信息

Acta Naturae. 2014 Jul;6(3):106-9.

Abstract

The complete decipherment of the functions and interactions of the elements of the riboflavin biosynthesis operon (rib operon) of Bacillus subtilis are necessary for the development of superproducers of this important vitamin. The function of its terminal ribT gene has not been established to date. In this work, a search for homologs of the hypothetical amino acid sequence of the gene product through databases, as well as an analysis of the homolgs, was performed; the distribution of secondary structure elements was theoretically predicted; and the tertiary structure of the RibT protein was proposed. The ribT gene nucleotide sequence was amplified and cloned into the standard high-copy expression vector pET15b and then expressed after induction with IPTG in E. coli BL21 (DE3) strain cells containing the inducible phage T7 RNA polymerase gene. The ribT gene expression was confirmed by SDS-PAGE. The protein product of the expression was purified by affinity chromatography. Therefore, the real possibility of RibT protein production in quantities sufficient for further investigation of its structure and functional activity was demonstrated.

摘要

全面解析枯草芽孢杆菌核黄素生物合成操纵子(rib操纵子)元件的功能及相互作用,对于培育这种重要维生素的高产菌株至关重要。该操纵子末端的ribT基因功能至今尚未明确。在本研究中,通过数据库搜索该基因产物假定氨基酸序列的同源物,并对这些同源物进行分析;从理论上预测二级结构元件的分布;并推测了RibT蛋白的三级结构。扩增ribT基因的核苷酸序列并克隆到标准的高拷贝表达载体pET15b中,然后在含有可诱导噬菌体T7 RNA聚合酶基因的大肠杆菌BL21(DE3)菌株细胞中用IPTG诱导表达。通过SDS-PAGE证实了ribT基因的表达。表达的蛋白质产物通过亲和层析进行纯化。因此,证明了有实际可能生产出足够量的RibT蛋白,用于进一步研究其结构和功能活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10d8/4207565/2da0430699f9/AN20758251-22-106-g001.jpg

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