• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

新生RNA感知小分子:一种控制细菌转录的机制

Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.

作者信息

Mironov Alexander S, Gusarov Ivan, Rafikov Ruslan, Lopez Lubov Errais, Shatalin Konstantin, Kreneva Rimma A, Perumov Daniel A, Nudler Evgeny

机构信息

State Research Institute of Genetics and Selection of Industrial Microorganisms, 113545, Moscow, Russia.

出版信息

Cell. 2002 Nov 27;111(5):747-56. doi: 10.1016/s0092-8674(02)01134-0.

DOI:10.1016/s0092-8674(02)01134-0
PMID:12464185
Abstract

Thiamin and riboflavin are precursors of essential coenzymes-thiamin pyrophosphate (TPP) and flavin mononucleotide (FMN)/flavin adenine dinucleotide (FAD), respectively. In Bacillus spp, genes responsible for thiamin and riboflavin biosynthesis are organized in tightly controllable operons. Here, we demonstrate that the feedback regulation of riboflavin and thiamin genes relies on a novel transcription attenuation mechanism. A unique feature of this mechanism is the formation of specific complexes between a conserved leader region of the cognate RNA and FMN or TPP. In each case, the complex allows the termination hairpin to form and interrupt transcription prematurely. Thus, sensing small molecules by nascent RNA controls transcription elongation of riboflavin and thiamin operons and possibly other bacterial operons as well.

摘要

硫胺素和核黄素分别是必需辅酶硫胺素焦磷酸(TPP)和黄素单核苷酸(FMN)/黄素腺嘌呤二核苷酸(FAD)的前体。在芽孢杆菌属中,负责硫胺素和核黄素生物合成的基因被组织在严格可控的操纵子中。在此,我们证明核黄素和硫胺素基因的反馈调节依赖于一种新型转录衰减机制。该机制的一个独特特征是同源RNA的保守前导区域与FMN或TPP之间形成特定复合物。在每种情况下,该复合物都能使终止发夹形成并过早中断转录。因此,新生RNA对小分子的感知控制着核黄素和硫胺素操纵子以及可能其他细菌操纵子的转录延伸。

相似文献

1
Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.新生RNA感知小分子:一种控制细菌转录的机制
Cell. 2002 Nov 27;111(5):747-56. doi: 10.1016/s0092-8674(02)01134-0.
2
An mRNA structure that controls gene expression by binding FMN.一种通过结合黄素单核苷酸(FMN)来控制基因表达的信使核糖核酸(mRNA)结构。
Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):15908-13. doi: 10.1073/pnas.212628899. Epub 2002 Nov 27.
3
Regulation of riboflavin biosynthesis in Bacillus subtilis is affected by the activity of the flavokinase/flavin adenine dinucleotide synthetase encoded by ribC.枯草芽孢杆菌中核黄素生物合成的调控受ribC编码的黄素激酶/黄素腺嘌呤二核苷酸合成酶活性的影响。
J Bacteriol. 1998 Feb;180(4):950-5. doi: 10.1128/JB.180.4.950-955.1998.
4
The ribR gene encodes a monofunctional riboflavin kinase which is involved in regulation of the Bacillus subtilis riboflavin operon.ribR基因编码一种单功能核黄素激酶,该激酶参与枯草芽孢杆菌核黄素操纵子的调控。
Microbiology (Reading). 1999 Jan;145 ( Pt 1):67-73. doi: 10.1099/13500872-145-1-67.
5
Roseoflavin is a natural antibacterial compound that binds to FMN riboswitches and regulates gene expression.玫瑰黄素是一种天然的抗菌化合物,它与 FMN 核糖开关结合并调节基因表达。
RNA Biol. 2009 Apr-Jun;6(2):187-94. doi: 10.4161/rna.6.2.7727. Epub 2009 Apr 30.
6
Regulatory mechanisms of 6,7-dimethyl-8-ribityllumazine formation in resting cells of a riboflavin-adenine-deficient mutant of Bacillus subtilis.枯草芽孢杆菌核黄素-腺嘌呤缺陷型突变体静息细胞中6,7-二甲基-8-核糖基卢马嗪形成的调控机制。
J Nutr Sci Vitaminol (Tokyo). 2005 Aug;51(4):271-3. doi: 10.3177/jnsv.51.271.
7
The speed of RNA transcription and metabolite binding kinetics operate an FMN riboswitch.RNA转录速度和代谢物结合动力学对FMN核糖开关起作用。
Mol Cell. 2005 Apr 1;18(1):49-60. doi: 10.1016/j.molcel.2005.02.032.
8
The ribB FMN riboswitch from Escherichia coli operates at the transcriptional and translational level and regulates riboflavin biosynthesis.来自大肠杆菌的ribB FMN核糖开关在转录和翻译水平上发挥作用,并调节核黄素的生物合成。
FEBS J. 2015 Aug;282(16):3230-42. doi: 10.1111/febs.13226. Epub 2015 Feb 27.
9
A dual control mechanism synchronizes riboflavin and sulphur metabolism in Bacillus subtilis.一种双重控制机制使枯草芽孢杆菌中的核黄素和硫代谢同步。
Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):14054-9. doi: 10.1073/pnas.1515024112. Epub 2015 Oct 22.
10
Genetic control by metabolite-binding riboswitches.代谢物结合核糖开关的基因调控
Chembiochem. 2003 Oct 6;4(10):1024-32. doi: 10.1002/cbic.200300685.

引用本文的文献

1
Autoregulation of RPL7B by inhibition of a structural splicing enhancer.通过抑制一种结构剪接增强子对RPL7B进行自动调节。
Nucleic Acids Res. 2025 Jul 19;53(14). doi: 10.1093/nar/gkaf739.
2
A virtual system-coupled molecular dynamics simulation free from experimental knowledge on binding sites: Application to RNA-ligand binding free-energy landscape.一种无需结合位点实验知识的虚拟系统耦合分子动力学模拟:应用于RNA-配体结合自由能景观。
Biophys Physicobiol. 2025 Apr 26;22(2):e220011. doi: 10.2142/biophysico.bppb-v22.0011. eCollection 2025.
3
Applying the brakes to transcription: regulation of gene expression by RNA polymerase pausing.
对转录踩刹车:RNA聚合酶暂停对基因表达的调控
J Bacteriol. 2025 Jul 24;207(7):e0008425. doi: 10.1128/jb.00084-25. Epub 2025 Jun 6.
4
In vivo structure profiling reveals human cytosolic and mitochondrial tRNA structurome and interactome in response to stress.体内结构分析揭示了人类细胞质和线粒体tRNA在应激反应中的结构组和相互作用组。
Nat Commun. 2025 May 30;16(1):5041. doi: 10.1038/s41467-025-59435-5.
5
TaRTLEt: Transcriptionally-active Riboswitch Tracer Leveraging Edge deTection.TaRTLEt:利用边缘检测的转录活性核糖开关示踪剂
PeerJ. 2025 May 26;13:e19418. doi: 10.7717/peerj.19418. eCollection 2025.
6
Low Fluoride Regulates Macrophage Polarization Through Mitochondrial Autophagy Mediated by PINK1/Parkin Axis.低氟通过PINK1/Parkin轴介导的线粒体自噬调节巨噬细胞极化
Biomolecules. 2025 Apr 30;15(5):647. doi: 10.3390/biom15050647.
7
From lab reagent to metabolite: the riboswitch ligand guanidine as a relevant compound in bacterial physiology.从实验室试剂到代谢物:核糖开关配体胍作为细菌生理学中的一种相关化合物。
J Bacteriol. 2025 Jun 24;207(6):e0007325. doi: 10.1128/jb.00073-25. Epub 2025 May 22.
8
Structure-based principles underlying ligand recognition of xanthine-II riboswitch.黄嘌呤-II核糖开关配体识别的基于结构的原理。
Sci China Life Sci. 2025 Apr 24. doi: 10.1007/s11427-024-2800-0.
9
Vitamin biosynthesis in the gut: interplay between mammalian host and its resident microbiota.肠道中的维生素生物合成:哺乳动物宿主与其常驻微生物群之间的相互作用。
Microbiol Mol Biol Rev. 2025 Jun 25;89(2):e0018423. doi: 10.1128/mmbr.00184-23. Epub 2025 Apr 2.
10
Origin of the RNA World in Cold Hadean Geothermal Fields Enriched in Zinc and Potassium: Abiogenesis as a Positive Fallout from the Moon-Forming Impact?富含锌和钾的冥古宙寒冷地热场中RNA世界的起源:月球形成撞击产生的正向影响导致的自然发生?
Life (Basel). 2025 Mar 4;15(3):399. doi: 10.3390/life15030399.