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从自然环境中分离出的两种酵母菌种,即新种嗜冷水生囊肿担子菌(Cystobasidium psychroaquaticum f.a. sp. nov.)和新种里氏囊肿担子菌(Cystobasidium rietchieii f.a. sp. nov.),以及将微小红酵母(Rhodotorula minuta)分支成员转移至囊肿担子菌属。

Two yeast species Cystobasidium psychroaquaticum f.a. sp. nov. and Cystobasidium rietchieii f.a. sp. nov. isolated from natural environments, and the transfer of Rhodotorula minuta clade members to the genus Cystobasidium.

作者信息

Yurkov A M, Kachalkin A V, Daniel H M, Groenewald M, Libkind D, de Garcia V, Zalar P, Gouliamova D E, Boekhout T, Begerow D

机构信息

Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124, Brunswick, Germany,

出版信息

Antonie Van Leeuwenhoek. 2015 Jan;107(1):173-85. doi: 10.1007/s10482-014-0315-0. Epub 2014 Nov 1.

Abstract

Many species of dimorphic basidiomycetes are known only in their asexual phase and typically those pigmented in different hues of red have been classified in the large polyphyletic genus Rhodotorula. These yeasts are ubiquitous and include a few species of some clinical relevance. The phylogenetic distribution of Rhodotorula spans three classes: Microbotryomycetes, Cystobasidiomycetes and Exobasidiomycetes. Here, the presented multi-gene analyses resolved phylogenetic relationships between the second largest group of Rhodotorula and the mycoparasite Cystobasidium fimetarium (Cystobasidiales, Cystobasidiomycetes, Pucciniomycotina). Based on the results, we propose the transfer of nine species belonging to the Rhodotorula minuta clade into the genus Cystobasidium. As a result, the clinically relevant species R. minuta will be renamed Cystobasidium minutum. This proposal follows ongoing reassessments of the anamorphic genus Rhodotorula reducing the polyphyly of this genus. The delimitation of the R. minuta clade from Rhodotorula species comprised in Sporidiobolales including the type species Rhodotorula glutinis is an important step to overcome obsolete generic placements of asexual basidiomycetous yeasts. Our proposal will also help to distinguish most common red yeasts from clinical samples such as members of Sporidiobolales and Cystobasidiales. The diagnosis of the genus Cystobasidium is amended by including additional characteristics known for the related group of species. The taxonomic change enables us to classify two novel species with the phylogenetically related members of the R. minuta clade in Cystobasidium. The recently from natural environments isolated species are described here as Cystobasidium psychroaquaticum f.a. sp. nov. (K-833(T) = KBP 3881(T) = VKPM Y-3653(T) = CBS 11769(T) = MUCL 52875(T) = DSM 27713(T)) and Cystobasidium rietchiei f.a. sp. nov. (K-780(T) = KBP 4220(T) = VKPM Y-3658(T) = CBS 12324(T) = MUCL 53589(T) = DSM 27155(T)). The new species were registered in MycoBank under MB 809336 and MB 809337, respectively.

摘要

许多二态担子菌仅在其无性阶段为人所知,通常那些呈现不同红色调的菌种被归类于大型多系属红酵母属(Rhodotorula)。这些酵母广泛存在,其中包括一些具有临床相关性的菌种。红酵母属的系统发育分布跨越三个纲:微球酵母菌纲(Microbotryomycetes)、囊担子菌纲(Cystobasidiomycetes)和外担子菌纲(Exobasidiomycetes)。在此,所呈现的多基因分析解析了红酵母属第二大组群与真菌寄生菌粪生囊担子菌(Cystobasidium fimetarium,囊担子菌目、囊担子菌纲、锈菌亚门)之间的系统发育关系。基于这些结果,我们提议将属于微小红酵母(Rhodotorula minuta)分支的九个菌种转移至囊担子菌属(Cystobasidium)。因此,具有临床相关性的微小红酵母菌种将被重新命名为微小囊担子菌(Cystobasidium minutum)。这一提议是基于对无性型红酵母属不断进行的重新评估,以减少该属的多系性。将微小红酵母分支与包括模式菌种粘红酵母(Rhodotorula glutinis)在内的掷孢酵母目(Sporidiobolales)中的红酵母属菌种区分开来,是克服无性担子菌酵母过时分类定位的重要一步。我们的提议也将有助于区分临床样本中最常见的红色酵母,如掷孢酵母目和囊担子菌目的成员。通过纳入相关菌种组已知的其他特征,对囊担子菌属的诊断进行了修订。这一分类学变化使我们能够将两个新物种与微小红酵母分支的系统发育相关成员一起归类于囊担子菌属。这里将最近从自然环境中分离出的物种描述为嗜冷水生囊担子菌(Cystobasidium psychroaquaticum f.a. sp. nov.,K-833(T) = KBP 3881(T) = VKPM Y-3653(T) = CBS 11769(T) = MUCL 52875(T) = DSM 27713(T))和里氏囊担子菌(Cystobasidium rietchiei f.a. sp. nov.,K-780(T) = KBP 4220(T) = VKPM Y-3658(T) = CBS 12324(T) = MUCL 53589(T) = DSM 27155(T))。这两个新物种分别在MycoBank上登记为MB 809336和MB 809337。

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