• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蔗糖水平升高介导拟南芥中的选择性mRNA翻译。

Increased sucrose levels mediate selective mRNA translation in Arabidopsis.

作者信息

Gamm Magdalena, Peviani Alessia, Honsel Anne, Snel Berend, Smeekens Sjef, Hanson Johannes

出版信息

BMC Plant Biol. 2014 Nov 18;14:306. doi: 10.1186/s12870-014-0306-3.

DOI:10.1186/s12870-014-0306-3
PMID:25403240
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4252027/
Abstract

BACKGROUND

Protein synthesis is a highly energy demanding process and is regulated according to cellular energy levels. Light and sugar availability affect mRNA translation in plant cells but the specific roles of these factors remain unclear. In this study, sucrose was applied to Arabidopsis seedlings kept in the light or in the dark, in order to distinguish sucrose and light effects on transcription and translation. These were studied using microarray analysis of steady-state mRNA and mRNA bound to translating ribosomes.

RESULTS

Steady-state mRNA levels were affected differently by sucrose in the light and in the dark but general translation increased to a similar extent in both conditions. For a majority of the transcripts changes of the transcript levels were followed by changes in polysomal mRNA levels. However, for 243 mRNAs, a change in polysomal occupancy (defined as polysomal levels related to steady-state levels of the mRNA) was observed after sucrose treatment in the light, but not in the dark condition. Many of these mRNAs are annotated as encoding ribosomal proteins, supporting specific translational regulation of this group of transcripts. Unexpectedly, the numbers of ribosomes bound to each mRNA decreased for mRNAs with increased polysomal occupancy.

CONCLUSIONS

Our results suggest that sucrose regulate translation of these 243 mRNAs specifically in the light, through a novel regulatory mechanism. Our data shows that increased polysomal occupancy is not necessarily leading to more ribosomes per transcript, suggesting a mechanism of translational induction not solely dependent on increased translation initiation rates.

摘要

背景

蛋白质合成是一个对能量需求很高的过程,并根据细胞能量水平进行调节。光照和糖分供应会影响植物细胞中的mRNA翻译,但这些因素的具体作用仍不清楚。在本研究中,将蔗糖施加于置于光照或黑暗条件下的拟南芥幼苗,以区分蔗糖和光照对转录和翻译的影响。使用对稳态mRNA和与正在翻译的核糖体结合的mRNA进行微阵列分析来研究这些影响。

结果

稳态mRNA水平在光照和黑暗条件下受蔗糖的影响不同,但总体翻译在两种条件下均有相似程度的增加。对于大多数转录本,转录水平的变化之后是多聚核糖体mRNA水平的变化。然而,对于243个mRNA,在光照条件下蔗糖处理后观察到多聚核糖体占有率(定义为与mRNA稳态水平相关的多聚核糖体水平)发生变化,而在黑暗条件下未观察到。这些mRNA中有许多被注释为编码核糖体蛋白,支持对这一组转录本的特异性翻译调控。出乎意料的是,对于多聚核糖体占有率增加的mRNA,与每个mRNA结合的核糖体数量减少。

结论

我们的结果表明,蔗糖通过一种新的调控机制,在光照条件下特异性地调节这243个mRNA的翻译。我们的数据表明,多聚核糖体占有率的增加不一定导致每个转录本有更多的核糖体,这表明存在一种翻译诱导机制,其不仅仅依赖于翻译起始速率的增加。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/d5cdce55003b/12870_2014_306_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/06ec0217eb7d/12870_2014_306_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/3f9211c3999c/12870_2014_306_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/18897e0b88cf/12870_2014_306_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/22f972f40fb9/12870_2014_306_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/98504b0e9eda/12870_2014_306_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/44c71b7216d6/12870_2014_306_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/d5cdce55003b/12870_2014_306_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/06ec0217eb7d/12870_2014_306_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/3f9211c3999c/12870_2014_306_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/18897e0b88cf/12870_2014_306_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/22f972f40fb9/12870_2014_306_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/98504b0e9eda/12870_2014_306_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/44c71b7216d6/12870_2014_306_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fec/4252027/d5cdce55003b/12870_2014_306_Fig7_HTML.jpg

相似文献

1
Increased sucrose levels mediate selective mRNA translation in Arabidopsis.蔗糖水平升高介导拟南芥中的选择性mRNA翻译。
BMC Plant Biol. 2014 Nov 18;14:306. doi: 10.1186/s12870-014-0306-3.
2
Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation.对缺氧拟南芥幼苗转录本丰度和翻译的全基因组分析。
Ann Bot. 2005 Sep;96(4):647-60. doi: 10.1093/aob/mci217. Epub 2005 Aug 4.
3
Cold shock protein 1 chaperones mRNAs during translation in Arabidopsis thaliana.冷休克蛋白 1 在拟南芥中转录翻译过程中充当 mRNA 的伴侣。
Plant J. 2013 Jun;74(6):1016-28. doi: 10.1111/tpj.12187. Epub 2013 May 6.
4
Translation initiation factor AteIF(iso)4E is involved in selective mRNA translation in Arabidopsis thaliana seedlings.在拟南芥幼苗中,翻译起始因子 AteIF(iso)4E 参与选择性 mRNA 翻译。
PLoS One. 2012;7(2):e31606. doi: 10.1371/journal.pone.0031606. Epub 2012 Feb 20.
5
The global translation profile in a ribosomal protein mutant resembles that of an eIF3 mutant.核糖体蛋白突变体的全球翻译特征类似于 eIF3 突变体。
BMC Biol. 2013 Dec 30;11:123. doi: 10.1186/1741-7007-11-123.
6
Analysis of mRNA translation states in Arabidopsis over the diurnal cycle by polysome microarray.通过多核糖体微阵列分析拟南芥在昼夜循环中的mRNA翻译状态。
Methods Mol Biol. 2014;1158:157-74. doi: 10.1007/978-1-4939-0700-7_10.
7
Widespread translational control contributes to the regulation of Arabidopsis photomorphogenesis.广泛的翻译调控对拟南芥光形态建成的调控起着重要作用。
Mol Syst Biol. 2012 Jan 17;8:566. doi: 10.1038/msb.2011.97.
8
Changes in Polysome Association of mRNA Throughout Growth and Development in Arabidopsis thaliana.拟南芥生长和发育过程中mRNA多核糖体结合的变化
Plant Cell Physiol. 2015 Nov;56(11):2169-80. doi: 10.1093/pcp/pcv133. Epub 2015 Sep 26.
9
Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.通过对拟南芥核糖体足迹的全基因组分析揭示翻译动力学。
Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):E203-12. doi: 10.1073/pnas.1317811111. Epub 2013 Dec 23.
10
Proteomic LC-MS analysis of Arabidopsis cytosolic ribosomes: Identification of ribosomal protein paralogs and re-annotation of the ribosomal protein genes.拟南芥胞质核糖体的蛋白质组液相色谱-质谱分析:核糖体蛋白旁系同源物的鉴定及核糖体蛋白基因的重新注释
J Proteomics. 2015 Oct 14;128:436-49. doi: 10.1016/j.jprot.2015.07.004. Epub 2015 Jul 29.

引用本文的文献

1
Optimization of growth conditions and the inducer concentration for increasing spike protein expression in recombinant and its kinetic modeling.优化生长条件和诱导剂浓度以提高重组体中刺突蛋白的表达及其动力学建模。
Biosci Microbiota Food Health. 2025;44(3):227-234. doi: 10.12938/bmfh.2024-110. Epub 2025 Apr 21.
2
Dynamics of ribosome composition and ribosomal protein phosphorylation in immune signaling in Arabidopsis thaliana.拟南芥免疫信号转导中核糖体组成和核糖体蛋白磷酸化的动态变化。
Nucleic Acids Res. 2023 Nov 27;51(21):11876-11892. doi: 10.1093/nar/gkad827.
3
Differential Participation of Plant Ribosomal Proteins from the Small Ribosomal Subunit in Protein Translation under Stress.

本文引用的文献

1
Selective mRNA sequestration by OLIGOURIDYLATE-BINDING PROTEIN 1 contributes to translational control during hypoxia in Arabidopsis.Oligouridylate-Binding Protein 1 通过选择性地结合 mRNA 来调控拟南芥低氧条件下的翻译。
Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2373-8. doi: 10.1073/pnas.1314851111. Epub 2014 Jan 27.
2
Ribosome profiling: new views of translation, from single codons to genome scale.核糖体图谱分析:从单个密码子到全基因组水平看翻译的新视角。
Nat Rev Genet. 2014 Mar;15(3):205-13. doi: 10.1038/nrg3645. Epub 2014 Jan 28.
3
The role of target of rapamycin signaling networks in plant growth and metabolism.
核糖体蛋白在胁迫下小核糖体亚基的蛋白翻译中的差异参与。
Biomolecules. 2023 Jul 21;13(7):1160. doi: 10.3390/biom13071160.
4
Microtuber Development under Darkness Unveiled through RNAseq Transcriptomic Analysis.黑暗条件下微型薯发育的 RNAseq 转录组分析。
Int J Mol Sci. 2022 Nov 10;23(22):13835. doi: 10.3390/ijms232213835.
5
Analysis of Thioredoxins and Glutaredoxins in Soybean: Evidence of Translational Regulation under Water Restriction.大豆中硫氧还蛋白和谷氧还蛋白的分析:水分限制下翻译调控的证据
Antioxidants (Basel). 2022 Aug 21;11(8):1622. doi: 10.3390/antiox11081622.
6
Multiomics approach reveals a role of translational machinery in shaping maize kernel amino acid composition.多组学方法揭示了翻译机制在塑造玉米籽粒氨基酸组成中的作用。
Plant Physiol. 2022 Jan 20;188(1):111-133. doi: 10.1093/plphys/kiab390.
7
Delayed Protein Changes During Seed Germination.种子萌发过程中的蛋白质变化延迟
Front Plant Sci. 2021 Sep 15;12:735719. doi: 10.3389/fpls.2021.735719. eCollection 2021.
8
Sugar modulation of anaerobic-response networks in maize root tips.玉米根尖厌氧反应网络的糖调控。
Plant Physiol. 2021 Mar 15;185(2):295-317. doi: 10.1093/plphys/kiaa029.
9
Systematic Review of Plant Ribosome Heterogeneity and Specialization.植物核糖体异质性与特化的系统综述
Front Plant Sci. 2020 Jun 25;11:948. doi: 10.3389/fpls.2020.00948. eCollection 2020.
10
Translational gene regulation in plants: A green new deal.植物中转译基因调控:绿色新政。
Wiley Interdiscip Rev RNA. 2020 Nov;11(6):e1597. doi: 10.1002/wrna.1597. Epub 2020 May 4.
雷帕霉素靶蛋白信号网络在植物生长和代谢中的作用。
Plant Physiol. 2014 Feb;164(2):499-512. doi: 10.1104/pp.113.229948. Epub 2014 Jan 2.
4
The global translation profile in a ribosomal protein mutant resembles that of an eIF3 mutant.核糖体蛋白突变体的全球翻译特征类似于 eIF3 突变体。
BMC Biol. 2013 Dec 30;11:123. doi: 10.1186/1741-7007-11-123.
5
Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.通过对拟南芥核糖体足迹的全基因组分析揭示翻译动力学。
Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):E203-12. doi: 10.1073/pnas.1317811111. Epub 2013 Dec 23.
6
Regulation of plant translation by upstream open reading frames.上游开放阅读框对植物翻译的调控。
Plant Sci. 2014 Jan;214:1-12. doi: 10.1016/j.plantsci.2013.09.006. Epub 2013 Sep 18.
7
Translational landscape of photomorphogenic Arabidopsis.拟南芥光形态建成的翻译组学全景
Plant Cell. 2013 Oct;25(10):3699-710. doi: 10.1105/tpc.113.114769. Epub 2013 Oct 31.
8
Translational Regulation of Cytoplasmic mRNAs.细胞质mRNA的翻译调控
Arabidopsis Book. 2013 Jul 18;11:e0165. doi: 10.1199/tab.0165. Print 2013.
9
Photosynthetic control of Arabidopsis leaf cytoplasmic translation initiation by protein phosphorylation.通过蛋白磷酸化对拟南芥叶片细胞质翻译起始的光合调控。
PLoS One. 2013 Jul 24;8(7):e70692. doi: 10.1371/journal.pone.0070692. Print 2013.
10
Diurnal changes of polysome loading track sucrose content in the rosette of wild-type arabidopsis and the starchless pgm mutant.野生型拟南芥和无淀粉质 pgm 突变体的花环中多核糖体负载轨迹蔗糖含量的昼夜变化。
Plant Physiol. 2013 Jul;162(3):1246-65. doi: 10.1104/pp.112.212258. Epub 2013 May 14.