Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35131 Padova, Italy, Department of Engineering, Pontificia Universidad Católica del Perú, San Miguel, 32 Lima, Perú and Department of Information Engineering, University of Padua, Via Gradenigo 6, 35121 Padova, Italy Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35131 Padova, Italy, Department of Engineering, Pontificia Universidad Católica del Perú, San Miguel, 32 Lima, Perú and Department of Information Engineering, University of Padua, Via Gradenigo 6, 35121 Padova, Italy.
Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35131 Padova, Italy, Department of Engineering, Pontificia Universidad Católica del Perú, San Miguel, 32 Lima, Perú and Department of Information Engineering, University of Padua, Via Gradenigo 6, 35121 Padova, Italy.
Bioinformatics. 2015 Apr 1;31(7):1138-40. doi: 10.1093/bioinformatics/btu773. Epub 2014 Nov 19.
Protein sequence and structure representation and manipulation require dedicated software libraries to support methods of increasing complexity. Here, we describe the VIrtual Constrution TOol for pRoteins (Victor) C++ library, an open source platform dedicated to enabling inexperienced users to develop advanced tools and gathering contributions from the community. The provided application examples cover statistical energy potentials, profile-profile sequence alignments and ab initio loop modeling. Victor was used over the last 15 years in several publications and optimized for efficiency. It is provided as a GitHub repository with source files and unit tests, plus extensive online documentation, including a Wiki with help files and tutorials, examples and Doxygen documentation.
The C++ library and online documentation, distributed under a GPL license are available from URL: http://protein.bio.unipd.it/victor/.
蛋白质序列和结构的表示和操作需要专用的软件库来支持日益复杂的方法。在这里,我们描述了用于蛋白质的虚拟构建工具(Victor)C++库,这是一个开源平台,致力于使没有经验的用户能够开发高级工具,并从社区中收集贡献。提供的应用示例涵盖统计能量势、轮廓-轮廓序列比对和从头开始的环建模。在过去的 15 年中,Victor 在多个出版物中得到了应用,并进行了效率优化。它作为一个 GitHub 存储库提供,其中包含源文件和单元测试,以及广泛的在线文档,包括带有帮助文件和教程、示例和 Doxygen 文档的 Wiki。
C++库和在线文档,根据 GPL 许可证分发,可从以下网址获得:http://protein.bio.unipd.it/victor/。