Kline Benjamin C, McKay Susannah L, Tang William W, Portnoy Daniel A
Department of Molecular and Cell Biology, University of California, Berkeley, California, USA.
Department of Molecular and Cell Biology, University of California, Berkeley, California, USA School of Public Health, University of California, Berkeley, California, USA
J Bacteriol. 2015 Feb;197(3):581-91. doi: 10.1128/JB.02223-14. Epub 2014 Nov 24.
During exposure to certain stresses, bacteria dimerize pairs of 70S ribosomes into translationally silent 100S particles in a process called ribosome hibernation. Although the biological roles of ribosome hibernation are not completely understood, this process appears to represent a conserved and adaptive response that contributes to optimal survival during stress and post-exponential-phase growth. Hibernating ribosomes are formed by the activity of one or more highly conserved proteins; gammaproteobacteria produce two relevant proteins, ribosome modulation factor (RMF) and hibernation promoting factor (HPF), while most Gram-positive bacteria produce a single, longer HPF protein. Here, we report the formation of 100S ribosomes by an HPF homolog in Listeria monocytogenes. L. monocytogenes 100S ribosomes were observed by sucrose density gradient centrifugation of bacterial extracts during mid-logarithmic phase, peaked at the transition to stationary phase, and persisted at lower levels during post-exponential-phase growth. 100S ribosomes were undetectable in bacteria carrying an hpf::Himar1 transposon insertion, indicating that HPF is required for ribosome hibernation in L. monocytogenes. Additionally, epitope-tagged HPF cosedimented with 100S ribosomes, supporting its previously described direct role in 100S formation. We examined hpf mRNA by quantitative PCR (qPCR) and identified several conditions that upregulated its expression, including carbon starvation, heat shock, and exposure to high concentrations of salt or ethanol. Survival of HPF-deficient bacteria was impaired under certain conditions both in vitro and during animal infection, providing evidence for the biological relevance of 100S ribosome formation.
在受到某些压力时,细菌会将成对的70S核糖体二聚化,形成翻译沉默的100S颗粒,这一过程称为核糖体休眠。尽管核糖体休眠的生物学作用尚未完全了解,但这一过程似乎代表了一种保守的适应性反应,有助于在压力和指数后期生长期间实现最佳生存。休眠核糖体是由一种或多种高度保守的蛋白质的活性形成的;γ-变形菌产生两种相关蛋白质,核糖体调节因子(RMF)和休眠促进因子(HPF),而大多数革兰氏阳性菌产生一种单一的、更长的HPF蛋白。在此,我们报道了单核细胞增生李斯特菌中一种HPF同源物形成100S核糖体的情况。通过对对数中期细菌提取物进行蔗糖密度梯度离心观察到单核细胞增生李斯特菌的100S核糖体,在向稳定期过渡时达到峰值,并在指数后期生长期间维持在较低水平。在携带hpf::Himar1转座子插入的细菌中未检测到100S核糖体,这表明HPF是单核细胞增生李斯特菌核糖体休眠所必需的。此外,表位标记的HPF与100S核糖体共沉降,支持了其先前描述的在100S形成中的直接作用。我们通过定量PCR(qPCR)检测了hpf mRNA,并确定了几种上调其表达的条件,包括碳饥饿、热休克以及暴露于高浓度的盐或乙醇中。在体外和动物感染期间,某些条件下HPF缺陷型细菌的存活率受损,这为100S核糖体形成的生物学相关性提供了证据。