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对日本三刺鱼进化枝的比较分析表明,太平洋谱系已适应淡水环境,而日本海谱系则没有。

Comparative analysis of Japanese three-spined stickleback clades reveals the Pacific Ocean lineage has adapted to freshwater environments while the Japan Sea has not.

作者信息

Ravinet Mark, Takeuchi Naoko, Kume Manabu, Mori Seiichi, Kitano Jun

机构信息

Ecological Genetics Laboratory, National Institute of Genetics, Mishima, Japan.

Biological Laboratory, Gifu-keizai University, Ogaki, Japan.

出版信息

PLoS One. 2014 Dec 2;9(12):e112404. doi: 10.1371/journal.pone.0112404. eCollection 2014.

DOI:10.1371/journal.pone.0112404
PMID:25460163
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4251985/
Abstract

Divergent selection and adaptive divergence can increase phenotypic diversification amongst populations and lineages. Yet adaptive divergence between different environments, habitats or niches does not occur in all lineages. For example, the colonization of freshwater environments by ancestral marine species has triggered adaptive radiation and phenotypic diversification in some taxa but not in others. Studying closely related lineages differing in their ability to diversify is an excellent means of understanding the factors promoting and constraining adaptive evolution. A well-known example of the evolution of increased phenotypic diversification following freshwater colonization is the three-spined stickleback. Two closely related stickleback lineages, the Pacific Ocean and the Japan Sea occur in Japan. However, Japanese freshwater stickleback populations are derived from the Pacific Ocean lineage only, suggesting the Japan Sea lineage is unable to colonize freshwater. Using stable isotope data and trophic morphology, we first show higher rates of phenotypic and ecological diversification between marine and freshwater populations within the Pacific Ocean lineage, confirming adaptive divergence has occurred between the two lineages and within the Pacific Ocean lineage but not in the Japan Sea lineage. We further identified consistent divergence in diet and foraging behaviour between marine forms from each lineage, confirming Pacific Ocean marine sticklebacks, from which all Japanese freshwater populations are derived, are better adapted to freshwater environments than Japan Sea sticklebacks. We suggest adaptive divergence between ancestral marine populations may have played a role in constraining phenotypic diversification and adaptive evolution in Japanese sticklebacks.

摘要

趋异选择和适应性分化能够增加种群和谱系间的表型多样化。然而,不同环境、栖息地或生态位之间的适应性分化并非在所有谱系中都会发生。例如,海洋祖先物种对淡水环境的定殖在某些类群中引发了适应性辐射和表型多样化,但在其他类群中却没有。研究在多样化能力上存在差异的近缘谱系是理解促进和限制适应性进化因素的绝佳方式。淡水定殖后表型多样化增加的一个著名例子是三刺鱼。在日本存在两个近缘的三刺鱼谱系,即太平洋谱系和日本海谱系。然而,日本的淡水三刺鱼种群仅源自太平洋谱系,这表明日本海谱系无法定殖到淡水环境中。利用稳定同位素数据和营养形态学,我们首先表明太平洋谱系内海洋和淡水种群之间的表型和生态多样化速率更高,证实了两个谱系之间以及太平洋谱系内部发生了适应性分化,而日本海谱系中则没有。我们进一步确定了每个谱系的海洋形态在饮食和觅食行为上存在一致的差异,证实了所有日本淡水种群的祖先——太平洋海洋三刺鱼比日本海三刺鱼更能适应淡水环境。我们认为祖先海洋种群之间的适应性分化可能在限制日本三刺鱼的表型多样化和适应性进化中发挥了作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/9005e2950a1c/pone.0112404.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/4b845a008090/pone.0112404.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/d9d1ed4c025f/pone.0112404.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/fe581db67767/pone.0112404.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/9005e2950a1c/pone.0112404.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/4b845a008090/pone.0112404.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/d9d1ed4c025f/pone.0112404.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/fe581db67767/pone.0112404.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1dcb/4251985/9005e2950a1c/pone.0112404.g004.jpg

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本文引用的文献

1
Phylogenetic Comparative Analysis: A Modeling Approach for Adaptive Evolution.系统发育比较分析:一种适应性进化的建模方法。
Am Nat. 2004 Dec;164(6):683-695. doi: 10.1086/426002.
2
STABILIZING SELECTION AND THE COMPARATIVE ANALYSIS OF ADAPTATION.稳定选择与适应性的比较分析
Evolution. 1997 Oct;51(5):1341-1351. doi: 10.1111/j.1558-5646.1997.tb01457.x.
3
GLOBAL SURVEY OF MITOCHONDRIAL DNA SEQUENCES IN THE THREESPINE STICKLEBACK: EVIDENCE FOR RECENT MIGRATIONS.三刺鱼线粒体DNA序列的全球调查:近期迁移的证据
三刺鱼在日本列岛的多次淡水殖民浪潮。
BMC Evol Biol. 2020 Nov 3;20(1):143. doi: 10.1186/s12862-020-01713-5.
4
Accumulation of Deleterious Mutations in Landlocked Threespine Stickleback Populations.内陆型三刺鱼种群中有害突变的积累。
Genome Biol Evol. 2020 Apr 1;12(4):479-492. doi: 10.1093/gbe/evaa065.
5
Does Body Shape in Adapt to Variation in Habitat Salinity?身体形态是否适应栖息地盐度的变化?
Front Physiol. 2019 Nov 15;10:1400. doi: 10.3389/fphys.2019.01400. eCollection 2019.
6
The genomic landscape at a late stage of stickleback speciation: High genomic divergence interspersed by small localized regions of introgression.刺鱼属物种形成后期的基因组景观:高度基因组分化,散布着小的局域基因渗入区域。
PLoS Genet. 2018 May 23;14(5):e1007358. doi: 10.1371/journal.pgen.1007358. eCollection 2018 May.
7
Sex Differences in Recombination in Sticklebacks.棘鱼重组中的性别差异。
G3 (Bethesda). 2018 May 31;8(6):1971-1983. doi: 10.1534/g3.118.200166.
8
Ongoing niche differentiation under high gene flow in a polymorphic brackish water threespine stickleback (Gasterosteus aculeatus) population.多态性咸淡水三刺鱼(Gasterosteus aculeatus)种群中高基因流条件下正在进行的生态位分化
BMC Evol Biol. 2018 Feb 5;18(1):14. doi: 10.1186/s12862-018-1128-y.
9
Impact of the huge 2011 Tohoku-oki tsunami on the phenotypes and genotypes of Japanese coastal threespine stickleback populations.2011 年东北大海啸对日本沿海三刺鱼种群表型和基因型的影响。
Sci Rep. 2018 Jan 26;8(1):1684. doi: 10.1038/s41598-018-20075-z.
10
Whole-genome sequencing reveals small genomic regions of introgression in an introduced crater lake population of threespine stickleback.全基因组测序揭示了引入的三刺鱼火山口湖种群中基因渗入的小基因组区域。
Ecol Evol. 2016 Mar 2;6(7):2190-204. doi: 10.1002/ece3.2047. eCollection 2016 Apr.
Evolution. 1994 Jun;48(3):608-622. doi: 10.1111/j.1558-5646.1994.tb01348.x.
4
THE POPULATION GENETICS OF ADAPTATION: THE DISTRIBUTION OF FACTORS FIXED DURING ADAPTIVE EVOLUTION.适应性的群体遗传学:适应性进化过程中固定因子的分布
Evolution. 1998 Aug;52(4):935-949. doi: 10.1111/j.1558-5646.1998.tb01823.x.
5
Founder niche constrains evolutionary adaptive radiation.奠基者生态位限制进化适应辐射。
Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20663-8. doi: 10.1073/pnas.1310310110. Epub 2013 Dec 4.
6
Repeated and predictable patterns of ecotypic differentiation during a biological invasion: lake-stream divergence in parapatric Swiss stickleback.在生物入侵过程中,生态型分化呈现出重复且可预测的模式:毗邻分布的瑞士刺鱼的湖泊-溪流分歧。
J Evol Biol. 2013 Dec;26(12):2691-709. doi: 10.1111/jeb.12267. Epub 2013 Oct 29.
7
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