Itskovich V B, Kaliuzhnaia O V, Belikov S I
Genetika. 2013 Aug;49(8):966-74. doi: 10.7868/s0016675813080031.
In order to investigate the phylogenetic relationships among endemic Baikal sponges of the Lubomirskiidae family and to clarify their taxonomy, the sequence variation at the silicatein-encoding gene and the mtDNA intergenic region was examined. Phylogenetic analysis of the silicatein α1 gene exonic regions in six freshwater sponge species revealed considerable interspecific variability of this region. The analysis performed did not support the monophyly of the Lubomirskia and Baikalospongia genera. The mDNA region between the COX2 and ATP6 genes was examined in five species from the Lubomirskiidae family, including multiple samples for analyzing intraspecific variations. According to the data obtained, the Baikalospongia genus was monophyletic with respect to Lubomirskia, while B. bacilifera and B. recta did not form monophyletic groups. Molecular data indicate that taxonomy of Lubomirskiidae should be revised. It was demonstrated that, in endemic Baikal sponges, the accelerated evolution was accompanied by an increase in the length of the noncoding regions in both mitochondrial and nuclear genes.
为了研究卢博米尔斯基科(Lubomirskiidae)贝加尔湖特有海绵之间的系统发育关系并阐明其分类,我们检测了编码硅酸蛋白的基因和线粒体DNA基因间区域的序列变异。对六种淡水海绵物种中硅酸蛋白α1基因外显子区域的系统发育分析表明,该区域存在显著的种间变异性。所进行的分析不支持卢博米尔斯基亚属(Lubomirskia)和贝加尔海绵属(Baikalospongia)的单系性。我们检测了卢博米尔斯基科五个物种中COX2和ATP6基因之间的线粒体DNA区域,包括多个用于分析种内变异的样本。根据所得数据,贝加尔海绵属相对于卢博米尔斯基亚属是单系的,而杆状贝加尔海绵(B. bacilifera)和直贝加尔海绵(B. recta)并未形成单系类群。分子数据表明,卢博米尔斯基科的分类需要修订。结果表明,在贝加尔湖特有海绵中,加速进化伴随着线粒体和核基因中非编码区域长度的增加。