Wang Pei, Yang Hai-Fan, Zhou Wei-Chuan, Hwang Chung-Chi, Zhang Wei-Hong, Qian Zhou-Xing
Key Laboratory of Molluscan Quarantine and Identification of AQSIQ, Fujian Entry-Exit Inspection & Quarantine Bureau, Fuzhou, Fujian 350001, China.
National Wetland Museum of China, Hangzhou, Zhejiang 310013, China.
Zookeys. 2014 Nov 3(451):33-48. doi: 10.3897/zookeys.451.8537. eCollection 2014.
The complete mitochondrial (mt) genome of the snail Camaenacicatricosa (Müller, 1774) has been sequenced and annotated in this study. The entire circular genome is 13,843 bp in size and represents the first camaenid mt genome, with content of 31.9%A, 37.9%T, 13.5%C and 16.7%G. Gene content, codon usage and base organization show similarity to a great extent to the sequenced mt genome from Stylommatophora, whereas, gene order is different from them, especially the positions of tRNA(Cys) , tRNA(Phe) , COII, tRNA(Asp) , tRNA(Gly) , tRNA(His) and tRNA(Trp) . All protein coding genes use standard initiation codons ATN except for COII with GTG as start signal. Conventional stop codons TAA and TAG have been assigned to all protein coding genes. All tRNA genes possess the typical clover leaf structure, but the TψC arm of tRNA(Asp) and dihydrouridine arm of tRNA(Ser(AGN)) only form a simple loop. Shorter intergenic spacers have been found in this mt genome. Phylogenetic study based on protein coding genes shows close relationship of Camaenidae and Bradybaenidae. The presented phylogeny is consistent with the monophyly of Stylommatophora.
本研究对蜗牛Camaenacicatricosa(Müller,1774)的完整线粒体(mt)基因组进行了测序和注释。整个环状基因组大小为13,843 bp,是首个记录的玛瑙螺科线粒体基因组,其中A含量为31.9%,T含量为37.9%,C含量为13.5%,G含量为16.7%。基因组成、密码子使用情况和碱基组成在很大程度上与柄眼目已测序的线粒体基因组相似,然而,基因顺序却不同,尤其是tRNA(Cys)、tRNA(Phe)、COII、tRNA(Asp)、tRNA(Gly)、tRNA(His)和tRNA(Trp)的位置。除COII以GTG作为起始信号外,所有蛋白质编码基因均使用标准起始密码子ATN。所有蛋白质编码基因都使用常规终止密码子TAA和TAG。所有tRNA基因都具有典型的三叶草叶结构,但tRNA(Asp)的TψC臂和tRNA(Ser(AGN))的二氢尿嘧啶臂仅形成简单环。在该线粒体基因组中发现了较短的基因间隔区。基于蛋白质编码基因的系统发育研究表明玛瑙螺科和巴蜗牛科关系密切。所呈现的系统发育与柄眼目的单系性一致。