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[人类基因组中Alu重复序列的分布:簇的形成及插入区域的特征]

[Distribution of Alu repeats along the human genome: formation of clusters and features of insertion regions].

作者信息

Shakhmuradov I A, Kolchanov N A, Kapitonov V V

出版信息

Mol Biol (Mosk). 1989 Mar-Apr;23(2):526-36.

PMID:2549397
Abstract

The contextual analysis of nucleotide sequences of 22 Alu repeats arrangement regions in the human genome has been carried out and some of their peculiarities have been revealed. In particular, the occurrence of marked and statistical non-random homology between the repeats and the regions of their integration has been shown. A mechanism of choosing the Alu repeats insertion regions in the genome has been suggested taking into account these peculiarities. Using a sample of the 80 human Alu repeats sequences peculiarities of these repeats location within the genome has been investigated. A tendency to the formation of Alu repeats clusters in various regions of the genome was revealed. A range of possible mechanisms on such Alu clusters emergence is considered. On the basis of the data obtained an "attraction" mechanism, according to which integration of Alu repeats into the definite region of the genome increases the insertion probability of other Alu repeats into the same region, are proposed.

摘要

对人类基因组中22个Alu重复序列排列区域的核苷酸序列进行了背景分析,并揭示了其中一些特性。特别是,已表明重复序列与其整合区域之间存在显著的统计非随机同源性。考虑到这些特性,提出了一种在基因组中选择Alu重复序列插入区域的机制。利用80个人类Alu重复序列样本,研究了这些重复序列在基因组中的定位特性。揭示了在基因组各个区域形成Alu重复序列簇的趋势。考虑了一系列关于此类Alu簇出现的可能机制。根据获得的数据,提出了一种“吸引”机制,即Alu重复序列整合到基因组的特定区域会增加其他Alu重复序列插入同一区域的概率。

相似文献

2
[Evolution of Alu repeats. Imitation model].
Genetika. 1989 Jun;25(6):1111-8.

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