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计算机辅助药物发现中的主动学习策略。

Active-learning strategies in computer-assisted drug discovery.

作者信息

Reker Daniel, Schneider Gisbert

机构信息

Swiss Federal Institute of Technology (ETH), Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 4, 8093 Zürich, Switzerland.

Swiss Federal Institute of Technology (ETH), Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 4, 8093 Zürich, Switzerland.

出版信息

Drug Discov Today. 2015 Apr;20(4):458-65. doi: 10.1016/j.drudis.2014.12.004. Epub 2014 Dec 9.

DOI:10.1016/j.drudis.2014.12.004
PMID:25499665
Abstract

High-throughput compound screening is time and resource consuming, and considerable effort is invested into screening compound libraries, profiling, and selecting the most promising candidates for further testing. Active-learning methods assist the selection process by focusing on areas of chemical space that have the greatest chance of success while considering structural novelty. The core feature of these algorithms is their ability to adapt the structure-activity landscapes through feedback. Instead of full-deck screening, only focused subsets of compounds are tested, and the experimental readout is used to refine molecule selection for subsequent screening cycles. Once implemented, these techniques have the potential to reduce costs and save precious materials. Here, we provide a comprehensive overview of the various computational active-learning approaches and outline their potential for drug discovery.

摘要

高通量化合物筛选既耗费时间又消耗资源,在筛选化合物库、分析以及选择最有前景的候选物进行进一步测试方面投入了大量精力。主动学习方法通过关注化学空间中最有可能成功的区域并考虑结构新颖性来辅助选择过程。这些算法的核心特征是它们能够通过反馈来适应构效关系格局。与全面筛选不同,只测试化合物的重点子集,并利用实验读数来优化分子选择以便进行后续的筛选循环。一旦实施,这些技术有可能降低成本并节省珍贵材料。在此,我们全面概述了各种计算主动学习方法,并概述了它们在药物发现中的潜力。

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