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一种RNA聚合酶II转录因子具有一种相关的依赖DNA的ATP酶(dATP酶)活性,该活性受到启动子的TATA区域的强烈刺激。

An RNA polymerase II transcription factor has an associated DNA-dependent ATPase (dATPase) activity strongly stimulated by the TATA region of promoters.

作者信息

Conaway R C, Conaway J W

机构信息

Department of Chemistry, University of Texas, Austin 78712-1096.

出版信息

Proc Natl Acad Sci U S A. 1989 Oct;86(19):7356-60. doi: 10.1073/pnas.86.19.7356.

DOI:10.1073/pnas.86.19.7356
PMID:2552440
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC298060/
Abstract

A transcription factor required for synthesis of accurately initiated run-off transcripts by RNA polymerase II has been purified and shown to have an associated DNA-dependent ATPase (dATPase) activity that is strongly stimulated by the TATA region of promoters. This transcription factor, designated delta, was purified more than 3000-fold from extracts of crude rat liver nuclei and has a native molecular mass of approximately 230 kDa. DNA-dependent ATPase (dATPase) and transcription activities copurify when delta is analyzed by hydrophobic interaction and ion-exchange HPLC, arguing that transcription factor delta possesses an ATPase (dATPase) activity. ATPase (dATPase) is specific for adenine nucleotides; ATP and dATP, but not CTP, UTP, or GTP, are hydrolyzed. ATPase (dATPase) is stimulated by both double-stranded and single-stranded DNAs, including pUC18, ssM13, and poly(dT); however, DNA fragments containing the TATA region of either the adenovirus 2 major late or mouse interleukin 3 promoters stimulate ATPase as much as 10-fold more effectively than DNA fragments containing nonpromoter sequences. These data suggest the intriguing possibility that delta plays a critical role in the ATP (dATP)-dependent activation of run-off transcription through a direct interaction with the TATA region of promoters.

摘要

一种RNA聚合酶II合成精确起始的连续转录本所必需的转录因子已被纯化,并显示具有一种相关的DNA依赖性ATP酶(dATP酶)活性,该活性受到启动子TATA区域的强烈刺激。这种转录因子被命名为δ,从大鼠粗制肝细胞核提取物中纯化了3000多倍,其天然分子量约为230 kDa。当通过疏水相互作用和离子交换HPLC分析δ时,DNA依赖性ATP酶(dATP酶)和转录活性共同纯化,这表明转录因子δ具有ATP酶(dATP酶)活性。ATP酶(dATP酶)对腺嘌呤核苷酸具有特异性;ATP和dATP可被水解,但CTP、UTP或GTP则不能。ATP酶(dATP酶)受到双链和单链DNA的刺激,包括pUC18、ssM13和聚(dT);然而,含有腺病毒2主要晚期或小鼠白细胞介素3启动子TATA区域的DNA片段比含有非启动子序列的DNA片段刺激ATP酶的效率高10倍。这些数据表明了一种有趣的可能性,即δ通过与启动子的TATA区域直接相互作用,在ATP(dATP)依赖性的连续转录激活中起关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/43c3df34f0e8/pnas00286-0069-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/464e0c0d2397/pnas00286-0068-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/b12bae326fc2/pnas00286-0068-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/43c3df34f0e8/pnas00286-0069-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/464e0c0d2397/pnas00286-0068-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/b12bae326fc2/pnas00286-0068-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2311/298060/43c3df34f0e8/pnas00286-0069-a.jpg

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本文引用的文献

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Multiple factors required for accurate initiation of transcription by purified RNA polymerase II.纯化的RNA聚合酶II准确起始转录需要多种因素。
J Biol Chem. 1980 Dec 25;255(24):11992-6.
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Mechanism of RNA polymerase II--specific initiation of transcription in vitro: ATP requirement and uncapped runoff transcripts.RNA聚合酶II在体外特异性起始转录的机制:ATP需求与无帽延伸转录本
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Separation and characterization of factors mediating accurate transcription by RNA polymerase II.
与通用转录因子TFIIH、核小体和组蛋白伴侣相关的内在无序蛋白质的动态结构。
Biophys Rev. 2022 Nov 18;14(6):1449-1472. doi: 10.1007/s12551-022-01014-9. eCollection 2022 Dec.
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Structural and dynamical insights into the PH domain of p62 in human TFIIH.人类 TFIIH 中 p62 的 PH 结构域的结构和动力学见解。
Nucleic Acids Res. 2021 Mar 18;49(5):2916-2930. doi: 10.1093/nar/gkaa1045.
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Envisioning how the prototypic molecular machine TFIIH functions in transcription initiation and DNA repair.设想原典型分子机器 TFIIH 在转录起始和 DNA 修复中的功能。
DNA Repair (Amst). 2020 Dec;96:102972. doi: 10.1016/j.dnarep.2020.102972. Epub 2020 Sep 17.
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Nascent RNA analyses: tracking transcription and its regulation.初生 RNA 分析:追踪转录及其调控。
Nat Rev Genet. 2019 Dec;20(12):705-723. doi: 10.1038/s41576-019-0159-6. Epub 2019 Aug 9.
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The essential and multifunctional TFIIH complex.必需且多功能的 TFIIH 复合物。
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介导RNA聚合酶II精确转录的因子的分离与特性分析。
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Transcription factors from oviduct and HeLa cells are similar.来自输卵管和宫颈癌细胞系的转录因子相似。
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Energy requirement for specific transcription initiation by the human RNA polymerase II system.人RNA聚合酶II系统特定转录起始的能量需求。
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Structural and functional studies of the dnaB protein using limited proteolysis. Characterization of domains for DNA-dependent ATP hydrolysis and for protein association in the primosome.利用有限蛋白酶解对dnaB蛋白进行结构和功能研究。对依赖DNA的ATP水解结构域以及引发体中蛋白质结合结构域的表征。
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