Klyne Johanna, Schmies Matthias, Fujii Masaaki, Dopfer Otto
Institut für Optik und Atomare Physik, Technische Universität Berlin , Hardenbergstrasse 36, 10623 Berlin, Germany.
J Phys Chem B. 2015 Jan 29;119(4):1388-406. doi: 10.1021/jp511421h. Epub 2015 Jan 14.
Hydration of peptides and proteins has a strong impact on their structure and function. Infrared photodissociation spectra (IRPD) of size-selected clusters of the formanilide cation, FA(+)-(H2O)n (n = 1-5), are analyzed by density functional theory calculations at the ωB97X-D/aug-cc-pVTZ level to determine the sequential microhydration of this prototypical aromatic amide cation. IRPD spectra are recorded in the hydride stretch and fingerprint ranges to probe the preferred interaction motifs and the cluster growth. IRPD spectra of cold Ar-tagged clusters, FA(+)-(H2O)n-Ar, reveal the important effects of temperature and entropy on the observed hydration motifs. At low temperature, the energetically most stable isomers are prominent, while at higher temperature less stable but more flexible isomers become increasingly populated because of entropy. In the most stable structures, the H2O ligands form a hydrogen-bonded solvent network attached to the acidic NH proton of the amide, which is stabilized by large cooperative effects arising from the excess positive charge. In larger clusters, hydration bridges the gap between the NH and CO groups (n ≥ 4) solvating the amide group rather than the more positively charged phenyl ring. Comparison with neutral FA-(H2O)n clusters reveals the strong impact of ionization on the acidity of the NH proton, the strength and topology of the interaction potential, and the structure of the hydration shell.
肽和蛋白质的水合作用对其结构和功能有强烈影响。通过在ωB97X-D/aug-cc-pVTZ水平上进行密度泛函理论计算,分析了甲酰苯胺阳离子FA(+)-(H2O)n(n = 1 - 5)的尺寸选择簇的红外光解离光谱(IRPD),以确定这种典型芳香酰胺阳离子的顺序微水合作用。在氢化物伸缩振动和指纹区域记录IRPD光谱,以探测优选的相互作用模式和簇的生长。冷Ar标记簇FA(+)-(H2O)n-Ar的IRPD光谱揭示了温度和熵对观察到的水合模式的重要影响。在低温下,能量上最稳定的异构体占主导,而在较高温度下,由于熵的原因,较不稳定但更灵活的异构体变得越来越多。在最稳定的结构中,H2O配体形成一个氢键溶剂网络,附着在酰胺的酸性NH质子上,该网络通过过量正电荷产生的大协同效应而稳定。在较大的簇中,水合作用弥合了NH和CO基团之间的间隙(n≥4),使酰胺基团溶剂化,而不是使带更多正电荷的苯环溶剂化。与中性FA-(H2O)n簇的比较揭示了电离对NH质子酸度、相互作用势的强度和拓扑结构以及水合壳层结构的强烈影响。