Schmidt J A, Yguerabide J
Department of Biology, University of California, San Diego, La Jolla 92093.
J Biol Chem. 1989 Nov 25;264(33):19790-803.
We present a quantitative kinetic model for the transient velocity (microM of cGMP hydrolyzed/s) response of retinal rod outer segment (ROS) cGMP phosphodiesterase (v(t) versus t) to a stimulating light pulse in the linear response range. The model gives an excellent fit to experimental v(t) versus t data for ROS suspensions at different concentrations of GTP and GDP and clarifies experimental results which are difficult to understand in the absence of such a model. It contains the minimum number of steps required to fit our experimental data and consists of one rate-limiting step with specific rate kL for the production of active phosphodiesterase (PDE), PDE*, by photoactivated rhodopsin, R*, and deactivation processes for R* and PDE* with lifetimes tau R and tau P, respectively. The experimental graphs of v(t) versus t at each concentration of GTP and GDP are characterized by a fast rise to a peak value, vpeak, followed by a slow decay to zero level. The minimal kinetic model allows us to characterized completely the effects of GTP and GDP, and any other pertinent species, in terms of their effects on the parameters kL, tau R, and tau P. Our kinetic model indicates that for "washed" ROS preparations (a) the risetime of v(t) is determined by tau P which has a value of about 2 s and is insensitive to [GTP]. (b) The decay of v(t) is determined by tau R which decreases with [GTP] and has a value greater than 300 s at low [GTP] and a limiting value of 50 s at high [GTP]. We attribute the greater than 300 s lifetime to the complex RG (where G is ROS G protein) and the 50-s lifetime to free R. (c) The rate kL increases hyperbolically with [GTP] with a half-maximal value of 56 microM and kL.max = 22-45 s-1. (d) Peak velocity is given by the expression vpeak alpha kL tau P which is consistent with the dependence of kL on [GTP] and the experimental finding that vpeak varies hyperbolically with [GTP]. The minimal model has also allowed us to (a) develop clear definitions of amplification for the light-triggered enzymatic cascade and (b) clarify experimental methods for measuring gain.(ABSTRACT TRUNCATED AT 400 WORDS)
我们提出了一种定量动力学模型,用于描述视网膜视杆外段(ROS)环磷酸鸟苷磷酸二酯酶在线性响应范围内对刺激光脉冲的瞬态速度(每秒水解的环磷酸鸟苷微摩尔数)响应(v(t) 与 t 的关系)。该模型对不同鸟苷三磷酸(GTP)和鸟苷二磷酸(GDP)浓度下ROS悬浮液的实验v(t) 与 t 数据拟合得非常好,并阐明了在没有此类模型的情况下难以理解的实验结果。它包含拟合我们实验数据所需的最少步骤数,由一个限速步骤组成,光活化视紫红质(R*)产生活性磷酸二酯酶(PDE),即PDE* 的特定速率为kL,以及R* 和PDE* 分别具有寿命tau R 和tau P 的失活过程。在每个GTP和GDP浓度下,v(t) 与 t 的实验图的特征是快速上升到峰值vpeak,然后缓慢衰减到零水平。最小动力学模型使我们能够根据GTP和GDP以及任何其他相关物质对参数kL、tau R 和tau P 的影响,全面表征它们的作用。我们的动力学模型表明,对于“洗涤过的”ROS制剂:(a)v(t) 的上升时间由tau P 决定,其值约为2秒,且对[GTP] 不敏感。(b)v(t) 的衰减由tau R 决定,tau R 随[GTP] 降低,在低[GTP] 时大于300秒,在高[GTP] 时极限值为50秒。我们将大于300秒的寿命归因于复合物RG(其中G是ROS G蛋白),50秒的寿命归因于游离R。(c)速率kL 随[GTP] 呈双曲线增加,半最大值为56微摩尔,kL.max = 22 - 45秒-1。(d)峰值速度由表达式vpeak α kL tau P 给出,这与kL 对[GTP] 的依赖性以及vpeak 随[GTP] 呈双曲线变化的实验结果一致。最小模型还使我们能够:(a)为光触发的酶促级联反应的放大制定清晰的定义,(b)阐明测量增益的实验方法。(摘要截断于400字)