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视杆外段环磷酸鸟苷磷酸二酯酶对光化性光脉冲的瞬态响应。II. 详细的定量动力学模型。

Transient response of rod outer segment cGMP phosphodiesterase to actinic light pulses. II. Detailed quantitative kinetic model.

作者信息

Yguerabide J, Schmidt J A

机构信息

Department of Biology, University of California, San Diego, La Jolla 92093.

出版信息

J Biol Chem. 1989 Nov 25;264(33):19804-14.

PMID:2555332
Abstract

In the accompanying article (Schmidt, J.A., and Yguerabide, J. (1989) J. Biol. Chem. 264, 19790-19803), we presented a minimal quantitative kinetic model with one rate-limiting step for the transient response of rod outer segment (ROS) phosphodiesterase (PDE) to stimulating light pulses of low fractional bleach (linear response range) and showed that the model was in excellent quantitative agreement with experimental results. The model characterizes the PDE response in terms of the specific rate constant of the rate-limiting step, kL, the lifetime of photoactivated rhodopsin, tau R, and the lifetime of activated PDE, tau P, but makes no predictions on how these kinetic parameters should depend on the concentrations of the various reactive species involved in the PDE response to light and does not reveal the nature of the rate-limiting step. However, we established by curve fitting experimental data to theoretical expressions from the model that kL increases hyperbolically with [GTP], tau R decreases with [GTP], and tau P is independent of GTP. In this report we present three detailed kinetic models which make specific quantitative predictions on how the kinetic parameters of the minimal model should depend on nucleotide and G protein concentrations and test the models against experimental data. Each model consists of one rate-limiting step. The first detailed model postulates that the rate-limiting step is the dissociation of RGT into R and GT (T stands for GTP). The second model postulates that the rate-limiting step is the binding of GTP to RG, and the third model postulates that the rate-limiting step is the encounter rate of R and G on the ROS disc membrane. We find that only the first detailed model is consistent with the experimental results as characterized by the minimal model. Using this detailed model we (a) define kL and tau R in terms of more fundamental equilibrium and rate parameters, (b) develop a theory for the systematic evaluation of amplification or gain of the PDE light response from light-stimulated GTP-binding data as well as v(t) versus t graphs, and (c) clarify methods which have been used in the past to evaluate gain experimentally.

摘要

在随附的文章中(施密特,J.A.,和伊格拉比德,J.(1989年)《生物化学杂志》264卷,19790 - 19803页),我们提出了一个最小定量动力学模型,该模型具有一个限速步骤,用于描述视杆外段(ROS)磷酸二酯酶(PDE)对低分数漂白的刺激光脉冲(线性响应范围)的瞬态响应,并表明该模型与实验结果在定量上高度吻合。该模型根据限速步骤的特定速率常数kL、光活化视紫红质的寿命tau R和活化PDE的寿命tau P来表征PDE响应,但没有预测这些动力学参数应如何依赖于参与PDE对光响应的各种反应物种的浓度,也没有揭示限速步骤的性质。然而,我们通过将实验数据与模型的理论表达式进行曲线拟合确定,kL随[GTP]呈双曲线增加,tau R随[GTP]降低,且tau P与GTP无关。在本报告中,我们提出了三个详细的动力学模型,这些模型对最小模型的动力学参数应如何依赖于核苷酸和G蛋白浓度做出了具体的定量预测,并根据实验数据对这些模型进行了检验。每个模型都包含一个限速步骤。第一个详细模型假定限速步骤是RGT解离为R和GT(T代表GTP)。第二个模型假定限速步骤是GTP与RG的结合,第三个模型假定限速步骤是R和G在ROS盘膜上的相遇速率。我们发现,只有第一个详细模型与最小模型所表征的实验结果一致。利用这个详细模型,我们(a)根据更基本的平衡和速率参数定义kL和tau R,(b)从光刺激的GTP结合数据以及v(t)对t的图中开发一种系统评估PDE光响应放大或增益的理论,(c)阐明过去用于实验评估增益的方法。

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