Nagao Satoshi, Ishikawa Haruto, Yamada Takuya, Mizutani Yasuhisa, Hirota Shun
Graduate School of Materials Science, Nara Institute of Science and Technology, 8916-5, Takayama, Ikoma, Nara, 630-0192, Japan.
J Biol Inorg Chem. 2015 Apr;20(3):523-30. doi: 10.1007/s00775-014-1236-0. Epub 2015 Jan 13.
Myoglobin (Mb) is a monomeric oxygen storage hemoprotein, and has been shown to form a domain-swapped dimer. In this study, monomeric and dimeric carbon monoxide (CO)-bound Mb (MbCO) exhibited similar absorption spectra. The CO stretching frequencies of MbCO were observed at 1,932 and 1,944 cm(-1) for both monomeric and dimeric MbCO. The resonance Raman (RR) bands for the stretching between the heme iron and axial ligands were observed at the same frequencies for the monomer and dimer of deoxygenated Mb (deoxyMb) and MbCO, respectively (ν Fe-His, 220 cm(-1); ν Fe-C, 507 cm(-1)), showing that the Fe-His bond strength of deoxyMb and the Fe-CO bond strength of MbCO did not change by the dimerization. Time-resolved RR measurements showed that the dynamics of the structural changes at the heme active site after CO photo-dissociation of MbCO was similar between monomeric and dimeric Mb [monomer, (5.2 ± 1.8) × 10(6) s(-1); dimer, (6.2 ± 1.1) × 10(6) s(-1) at room temperature]. These results show that the heme coordination structure, the protein environment around the bound CO, and the protein relaxation character are similar between monomeric and dimeric MbCO. Although the active site structure was similar between the monomer and dimer, the CO binding rate constant of dimeric Mb [(1.01 ± 0.03) × 10(6) M(-1) s(-1) at 20 °C] was about twice larger than that of the monomer [(0.52 ± 0.02) × 10(6) M(-1) s(-1) at 20 °C], presumably due to the expansion of the channel between the Xe3 cavity and the solvent by the dimerization.
肌红蛋白(Mb)是一种单体氧储存血红蛋白,已被证明可形成结构域交换二聚体。在本研究中,单体和二聚体一氧化碳(CO)结合的Mb(MbCO)表现出相似的吸收光谱。单体和二聚体MbCO的CO伸缩频率均在1932和1944 cm⁻¹处观察到。分别在脱氧Mb(deoxyMb)和MbCO的单体和二聚体的相同频率处观察到血红素铁与轴向配体之间伸缩的共振拉曼(RR)带(νFe-His,220 cm⁻¹;νFe-C,507 cm⁻¹),表明脱氧Mb的Fe-His键强度和MbCO的Fe-CO键强度不会因二聚化而改变。时间分辨RR测量表明,MbCO的CO光解离后血红素活性位点的结构变化动力学在单体和二聚体Mb之间相似[单体,(5.2±1.8)×10⁶ s⁻¹;二聚体,室温下为(6.2±1.1)×10⁶ s⁻¹]。这些结果表明,单体和二聚体MbCO之间的血红素配位结构、结合CO周围的蛋白质环境以及蛋白质弛豫特性相似。尽管单体和二聚体之间的活性位点结构相似,但二聚体Mb的CO结合速率常数[(20 °C时为(1.01±0.03)×10⁶ M⁻¹ s⁻¹]约为单体[(20 °C时为(0.52±0.02)×10⁶ M⁻¹ s⁻¹]的两倍,这可能是由于二聚化导致Xe3腔与溶剂之间的通道扩大。