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用于先导化合物发现的环状肽库构建方法。

Methods for the creation of cyclic Peptide libraries for use in lead discovery.

作者信息

Foster Andrew D, Ingram James D, Leitch Eilidh K, Lennard Katherine R, Osher Eliot L, Tavassoli Ali

机构信息

Chemistry, University of Southampton, Southampton, UK.

Chemistry, University of Southampton, Southampton, UK Cancer Sciences, University of Southampton, Southampton, UK

出版信息

J Biomol Screen. 2015 Jun;20(5):563-76. doi: 10.1177/1087057114566803. Epub 2015 Jan 13.

DOI:10.1177/1087057114566803
PMID:25586497
Abstract

The identification of initial hits is a crucial stage in the drug discovery process. Although many projects adopt high-throughput screening of small-molecule libraries at this stage, there is significant potential for screening libraries of macromolecules created using chemical biology approaches. Not only can the production of the library be directly interfaced with a cell-based assay, but these libraries also require significantly fewer resources to generate and maintain. In this context, cyclic peptides are increasingly viewed as ideal scaffolds and have proven capability against challenging targets such as protein-protein interactions. Here we discuss a range of methods used for the creation of cyclic peptide libraries and detail examples of their successful implementation.

摘要

确定初始命中物是药物发现过程中的关键阶段。尽管许多项目在此阶段采用小分子文库的高通量筛选,但使用化学生物学方法创建的大分子文库的筛选具有巨大潜力。不仅文库的生产可以直接与基于细胞的检测相结合,而且生成和维护这些文库所需的资源也显著减少。在这种背景下,环肽越来越被视为理想的支架,并且已证明对诸如蛋白质-蛋白质相互作用等具有挑战性的靶点具有作用。在这里,我们讨论了一系列用于创建环肽文库的方法,并详细介绍了它们成功实施的实例。

相似文献

1
Methods for the creation of cyclic Peptide libraries for use in lead discovery.用于先导化合物发现的环状肽库构建方法。
J Biomol Screen. 2015 Jun;20(5):563-76. doi: 10.1177/1087057114566803. Epub 2015 Jan 13.
2
Genetically Encoded Cyclic Peptide Libraries: From Hit to Lead and Beyond.基因编码环肽文库:从活性分子到先导化合物及其他。
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3
SICLOPPS cyclic peptide libraries in drug discovery.用于药物发现的SICLOPPS环肽文库。
Curr Opin Chem Biol. 2017 Jun;38:30-35. doi: 10.1016/j.cbpa.2017.02.016. Epub 2017 Mar 1.
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Peptides come round: using SICLOPPS libraries for early stage drug discovery.环肽回归:利用SICLOPPS文库进行早期药物研发
Chemistry. 2014 Aug 18;20(34):10608-14. doi: 10.1002/chem.201403117. Epub 2014 Jul 9.
5
Genetic Selections with SICLOPPS Libraries: Toward the Identification of Novel Protein-Protein Interaction Inhibitors and Chemical Tools.利用SICLOPPS文库进行遗传筛选:迈向新型蛋白质-蛋白质相互作用抑制剂和化学工具的鉴定
Methods Mol Biol. 2019;2001:317-328. doi: 10.1007/978-1-4939-9504-2_15.
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Cyclic Peptide Screening Methods for Preclinical Drug Discovery.临床前药物发现的环状肽筛选方法。
J Med Chem. 2022 Sep 22;65(18):11913-11926. doi: 10.1021/acs.jmedchem.2c01077. Epub 2022 Sep 8.
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Fragment-based approaches to the discovery of kinase inhibitors.基于片段的激酶抑制剂发现方法。
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Intracellular Production of Cyclic Peptide Libraries with SICLOPPS.利用SICLOPPS进行环肽文库的胞内生产。
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Selection-based discovery of macrocyclic peptides for the next generation therapeutics.基于筛选的大环肽发现用于下一代治疗药物。
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引用本文的文献

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Enzyme-free biochemical production of seamlessly N-to-C cyclized peptides from natural or recombinant proteins.从天然或重组蛋白质中无酶生化生产无缝N端到C端环化肽。
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Exploring the Chemical Features and Biomedical Relevance of Cell-Penetrating Peptides.探索细胞穿透肽的化学特性及生物医学相关性。
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Expression and Subcellular Localization of Lanthipeptides in Human Cells.在人细胞中兰尼肽的表达和亚细胞定位。
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Expression of Lanthipeptides in Human Cells.羊毛硫肽在人细胞中的表达。
bioRxiv. 2023 Oct 23:2023.10.19.563208. doi: 10.1101/2023.10.19.563208.
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High-Throughput Screening of Natural Product and Synthetic Molecule Libraries for Antibacterial Drug Discovery.用于抗菌药物发现的天然产物和合成分子文库的高通量筛选
Metabolites. 2023 May 2;13(5):625. doi: 10.3390/metabo13050625.
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Methods for generating and screening libraries of genetically encoded cyclic peptides in drug discovery.药物研发中基因编码环肽文库的生成与筛选方法。
Nat Rev Chem. 2020 Feb;4(2):90-101. doi: 10.1038/s41570-019-0159-2. Epub 2020 Jan 17.
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Development of a Cyclic, Cell Penetrating Peptide Compatible with In Vitro Selection Strategies.开发一种与体外选择策略兼容的环状、细胞穿透肽。
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Lipid Composition Is Critical for Accurate Membrane Permeability Prediction of Cyclic Peptides by Molecular Dynamics Simulations.脂质组成对于通过分子动力学模拟准确预测环肽的膜通透性至关重要。
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Novel Cyclic Peptides for Targeting EGFR and EGRvIII Mutation for Drug Delivery.用于靶向表皮生长因子受体(EGFR)和表皮生长因子受体变异体III(EGRvIII)突变以进行药物递送的新型环肽
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