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在无需DNA分离和扩增的情况下,于250倍野生型背景中对尿液进行特异性原位乙肝病毒双突变(HBVDM)检测,分析灵敏度达60拷贝/毫升。

Specific in situ hepatitis B viral double mutation (HBVDM) detection in urine with 60 copies ml(-1) analytical sensitivity in a background of 250-fold wild type without DNA isolation and amplification.

作者信息

Kirimli Ceyhun E, Shih Wei-Heng, Shih Wan Y

机构信息

Drexel University, School of Biomedical Engineering, Science, and Health Systems, Philadelphia, Pennsylvania, USA.

出版信息

Analyst. 2015 Mar 7;140(5):1590-8. doi: 10.1039/c4an01885k. Epub 2015 Jan 19.

DOI:10.1039/c4an01885k
PMID:25599103
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6542474/
Abstract

We have examined in situ detection of hepatitis B virus 1762T/1764A double mutation (HBVDM) in urine using a (Pb(Mg(1/3)Nb(2/3))O3)(0.65)(PbTiO3)(0.35) (PMN-PT) piezoelectric plate sensor (PEPS) coated with a 16-nucleotide (nt) probe DNA (pDNA) complementary to the HBVDM. The in situ mutation (MT) detection was carried out in a flow with the PEPS vertically situated at the center of the flow in a background of wild type (WT). For validation, this detection was followed by detection in the mixture of MT fluorescent reporter microspheres (FRMs) (MT FRMs) and WT FRMs that emitted different fluorescence colours and were designed to specifically bind to MT and WT, respectively. At 30 °C and 4 ml min(-1), a PEPS was shown to specifically detect HBVDM in situ with 60 copies ml(-1) analytical sensitivity in a background of clinically-relevant 250-fold more WT in 30 min without DNA isolation, amplification, or labelling as validated by the visualization of the captured MT FRMs and WT FRMs following FRM detection where the captured MT FRMs outnumbered the WT FRMs by a factor of 5 to 1.

摘要

我们使用涂有与乙肝病毒1762T/1764A双突变(HBVDM)互补的16个核苷酸(nt)探针DNA(pDNA)的(Pb(Mg(1/3)Nb(2/3))O3)(0.65)(PbTiO3)(0.35)(PMN-PT)压电板传感器(PEPS),对尿液中的乙肝病毒1762T/1764A双突变进行了原位检测。原位突变(MT)检测在流动体系中进行,PEPS垂直置于流动中心,背景为野生型(WT)。为进行验证,在MT荧光报告微球(FRMs)(MT FRMs)和WT FRMs的混合物中进行检测,它们发出不同荧光颜色,分别设计用于特异性结合MT和WT。在30℃和4 ml min⁻¹条件下,PEPS在30分钟内能够在临床相关的比WT多250倍的背景中以60拷贝ml⁻¹的分析灵敏度原位特异性检测HBVDM,无需进行DNA分离、扩增或标记,通过FRM检测后捕获的MT FRMs和WT FRMs的可视化验证,其中捕获的MT FRMs数量比WT FRMs多5倍至1倍。

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本文引用的文献

1
DNA hybridization detection with 100 zM sensitivity using piezoelectric plate sensors with an improved noise-reduction algorithm.使用具有改进降噪算法的压电板传感器进行灵敏度为100 zM的DNA杂交检测。
Analyst. 2014 Jun 7;139(11):2754-63. doi: 10.1039/c4an00215f.
2
Temperature- and flow-enhanced detection specificity of mutated DNA against the wild type with reporter microspheres.利用示踪微球增强温度和流量对突变型 DNA 与野生型 DNA 的检测特异性。
Analyst. 2013 Oct 21;138(20):6117-26. doi: 10.1039/c3an00384a.
3
Real-time, in situ DNA hybridization detection with attomolar sensitivity without amplification using (pb(Mg1/3Nb2/3)O3)0.65-(PbTiO3)0.35 piezoelectric plate sensors.
在 60 拷贝/ml 的尿液中,原位、无需扩增的双链突变检测,野生型有千倍稀释。
Biosens Bioelectron. 2018 Nov 15;119:221-229. doi: 10.1016/j.bios.2018.07.062. Epub 2018 Jul 31.
使用(pb(Mg1/3Nb2/3)O3)0.65-(PbTiO3)0.35 压电板传感器,实现了无放大的实时、原位、纳摩尔灵敏度的 DNA 杂交检测。
Biosens Bioelectron. 2013 May 15;43:391-9. doi: 10.1016/j.bios.2012.12.044. Epub 2012 Dec 31.
4
Predictive power of hepatitis B 1762T/1764A mutations in plasma for hepatocellular carcinoma risk in Qidong, China.乙型肝炎病毒 1762T/1764A 突变在血浆中对中国启东肝癌风险的预测能力。
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