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氨基酸和肽如何塑造了RNA世界。

How amino acids and peptides shaped the RNA world.

作者信息

van der Gulik Peter T S, Speijer Dave

机构信息

Centrum Wiskunde & Informatica, Science Park 123, 1098 SJ Amsterdam, The Netherlands.

Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ Amsterdam, The Netherlands.

出版信息

Life (Basel). 2015 Jan 19;5(1):230-46. doi: 10.3390/life5010230.

Abstract

The "RNA world" hypothesis is seen as one of the main contenders for a viable theory on the origin of life. Relatively small RNAs have catalytic power, RNA is everywhere in present-day life, the ribosome is seen as a ribozyme, and rRNA and tRNA are crucial for modern protein synthesis. However, this view is incomplete at best. The modern protein-RNA ribosome most probably is not a distorted form of a "pure RNA ribosome" evolution started out with. Though the oldest center of the ribosome seems "RNA only", we cannot conclude from this that it ever functioned in an environment without amino acids and/or peptides. Very small RNAs (versatile and stable due to basepairing) and amino acids, as well as dipeptides, coevolved. Remember, it is the amino group of aminoacylated tRNA that attacks peptidyl-tRNA, destroying the bond between peptide and tRNA. This activity of the amino acid part of aminoacyl-tRNA illustrates the centrality of amino acids in life. With the rise of the "RNA world" view of early life, the pendulum seems to have swung too much towards the ribozymatic part of early biochemistry. The necessary presence and activity of amino acids and peptides is in need of highlighting. In this article, we try to bring the role of the peptide component of early life back into focus. We argue that an RNA world completely independent of amino acids never existed.

摘要

“RNA世界”假说被视为关于生命起源的可行理论的主要竞争者之一。相对较小的RNA具有催化能力,RNA在当今生命中无处不在,核糖体被视为一种核酶,并且rRNA和tRNA对现代蛋白质合成至关重要。然而,这种观点充其量是不完整的。现代蛋白质-RNA核糖体很可能不是进化起始时“纯RNA核糖体”的一种畸变形式。尽管核糖体最古老的中心似乎“仅由RNA构成”,但我们不能据此得出它曾在没有氨基酸和/或肽的环境中发挥作用的结论。非常小的RNA(由于碱基配对而具有通用性和稳定性)与氨基酸以及二肽共同进化。请记住,氨酰化tRNA的氨基会攻击肽基-tRNA,破坏肽与tRNA之间的键。氨酰-tRNA的氨基酸部分的这种活性说明了氨基酸在生命中的核心地位。随着早期生命“RNA世界”观点的兴起,钟摆似乎过度摆向了早期生物化学的核酶部分。氨基酸和肽的必要存在及活性需要得到强调。在本文中,我们试图让早期生命中肽成分的作用重新成为焦点。我们认为,一个完全独立于氨基酸的RNA世界从未存在过。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d5e4/4390850/c00c7248b600/life-05-00230-g001.jpg

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