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叶珊瑚(十字牡丹珊瑚,石珊瑚目,鹿角珊瑚科)的完整线粒体基因组

Complete mitochondrial genome of leaf coral Pavona decussata (Scleractinia, Agariciidae).

作者信息

Shi Xiaofeng, Lin Rongcheng, Zheng Xinqing, Liu Xinming, Niu Wentao

机构信息

a Laboratory of Marine Biology and Ecology , Third Institute of Oceanography, State Oceanic Administration , Xiamen , P.R. China and.

b Guangxi Academy of Oceanography , Nanning , P.R. China.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3126-7. doi: 10.3109/19401736.2015.1007296. Epub 2015 Jan 29.

Abstract

The leaf coral Pavona decussate is a wide-spread shallow-water species of genus Pavona within Agariciidae. In our study, the entire mitochondrial nucleotide sequence of P. decussate was determined. The sequence was 18,378 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes (small and large mitochondrial ribosomal RNA) and 2 transfer RNA genes (tRNA(Met) and tRNA(Trp)). The overall base composition of the mitogenome was 23.8% A, 35.4% T, 25.4% G, and 15.4% C, with a high AT content of 59.3%, which is typical for invertebrate mtDNA. It shared 97.9%, 96.2% and 89.3% mitogenome sequence with P. clavus, Agaricia humilis and Astreopora myriophthalma, respectively.

摘要

叶珊瑚十字牡丹珊瑚是鹿角珊瑚科帕沃那属一种广泛分布的浅水物种。在我们的研究中,测定了十字牡丹珊瑚完整的线粒体核苷酸序列。该序列长度为18378bp,包含13个蛋白质编码基因、2个核糖体RNA基因(小线粒体核糖体RNA和大线粒体核糖体RNA)以及2个转运RNA基因(tRNA(Met)和tRNA(Trp))。线粒体基因组的总体碱基组成为23.8%A、35.4%T、25.4%G和15.4%C,AT含量高达59.3%,这是无脊椎动物线粒体DNA的典型特征。它与棒形牡丹珊瑚、扁脑珊瑚和多眼星孔珊瑚的线粒体基因组序列分别共享97.9%、96.2%和89.3%。

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