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肠道转录组分析揭示了两种罗非鱼属鱼类在盐度适应方面的差异。

Intestinal transcriptome analysis revealed differential salinity adaptation between two tilapiine species.

作者信息

Ronkin Dana, Seroussi Eyal, Nitzan Tali, Doron-Faigenboim Adi, Cnaani Avner

机构信息

Institute of Animal Science, Agricultural Research Organization, Bet Dagan 50250, Israel.

Institute of Animal Science, Agricultural Research Organization, Bet Dagan 50250, Israel.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2015 Mar;13:35-43. doi: 10.1016/j.cbd.2015.01.003. Epub 2015 Jan 26.

DOI:10.1016/j.cbd.2015.01.003
PMID:25637752
Abstract

Tilapias are a group of freshwater species, which vary in their ability to adapt to high salinity water. Osmotic regulation in fish is conducted mainly in the gills, kidney, and gastrointestinal tract (GIT). The mechanisms involved in ion and water transport through the GIT is not well-characterized, with only a few described complexes. Comparing the transcriptome of the anterior and posterior intestinal sections of a freshwater and saltwater adapted fish by deep-sequencing, we examined the salinity adaptation of two tilapia species: the high salinity-tolerant Oreochromis mossambicus (Mozambique tilapia), and the less salinity-tolerant Oreochromis niloticus (Nile tilapia). This comparative analysis revealed high similarity in gene expression response to salinity change between species in the posterior intestine and large differences in the anterior intestine. Furthermore, in the anterior intestine 68 genes were saltwater up-regulated in one species and down-regulated in the other species (47 genes up-regulated in O. niloticus and down-regulated in O. mossambicus, with 21 genes showing the reverse pattern). Gene ontology (GO) analysis showed a high proportion of transporter and ion channel function among these genes. The results of this study point to a group of genes that differed in their salinity-dependent regulation pattern in the anterior intestine as potentially having a role in the differential salinity tolerance of these two closely related species.

摘要

罗非鱼是一类淡水物种,它们适应高盐度水的能力各不相同。鱼类的渗透调节主要在鳃、肾脏和胃肠道(GIT)中进行。通过胃肠道进行离子和水运输的机制尚未得到充分表征,仅有少数已描述的复合体。通过深度测序比较适应淡水和咸水的鱼类前肠和后肠部分的转录组,我们研究了两种罗非鱼的盐度适应性:耐高盐的莫桑比克罗非鱼(Oreochromis mossambicus)和耐盐性较差的尼罗罗非鱼(Oreochromis niloticus)。这种比较分析揭示了后肠中物种间对盐度变化的基因表达反应高度相似,而前肠中则存在很大差异。此外,在前肠中,有68个基因在一个物种中受咸水诱导上调而在另一个物种中下调(47个基因在尼罗罗非鱼中上调而在莫桑比克罗非鱼中下调,21个基因呈现相反模式)。基因本体(GO)分析表明这些基因中转运蛋白和离子通道功能的比例很高。本研究结果指出,在前肠中盐度依赖性调节模式不同的一组基因可能在这两个密切相关物种的不同盐度耐受性中发挥作用。

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