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用于伊朗人体内脏利什曼病诊断的环介导等温扩增(LAMP)检测方法的开发与评估

Development and Assessment of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Iran.

作者信息

Ghasemian Mehrdad, Gharavi Mohammad Javad, Akhlaghi Lame, Mohebali Mehdi, Meamar Ahmad Reza, Aryan Ehsan, Oormazdi Hormozd

机构信息

Department of Parasitology and Mycology, Faculty of Medicine, Iran University of Medical Sciences, Tehran, Iran.

Department of Parasitology, Faculty of Allied Medicine, Iran University of Medical Sciences, Tehran, Iran.

出版信息

Iran J Parasitol. 2014 Mar;9(1):50-9.

Abstract

BACKGROUND

Parasitological methods for the diagnosis of Visceral leishmaniasis (VL) require invasive procedures, so serological and molecular approaches have been developed but are not generally applicable in the field. We evaluated a loop mediated isothermal amplification (LAMP) assay using blood from VL patients and compared it to nested PCR.

METHODS

Forty-seven subjects with clinical features (fever, hepatosplenomegaly and anemia) were confirmed positive for VL by the direct agglutination test (DAT) at titers >3200. Forty DAT negative individuals from non-endemic areas with no clinical signs or symptoms of VL served as controls. A LAMP assay was performed using a set of six primers targeting Leishmania infantum kinetoplast DNA (kDNA) minicircle gene under isothermal (64 °C) conditions. For nested PCR we used primers targeting the kDNA minicircle gene.

RESULTS

The LAMP assay provided a detection limit of 1 parasite in 1 ml of peripheral blood and detected L. infantum DNA in 44 of 47 DAT-confirmed VL cases, with diagnostic sensitivity of 93.6% (95% CI). No L. infantum DNA was amplified in controls, indicating a specificity of 100%. The nested PCR yielded sensitivity of 96% (95% CI) and a specificity of 100% (95% CI).

CONCLUSION

The LAMP assay gave results similar to those of nested PCR but in a shorter time. The LAMP method is simple; requires no sophisticated equipment; has a short reaction time; and results, indicated by turbidity of the reaction mixture, are observable with the naked eye.

摘要

背景

内脏利什曼病(VL)的寄生虫学诊断方法需要侵入性操作,因此已开发出血清学和分子学方法,但这些方法通常不适用于现场。我们评估了一种使用VL患者血液的环介导等温扩增(LAMP)检测方法,并将其与巢式PCR进行比较。

方法

47名具有临床特征(发热、肝脾肿大和贫血)的受试者通过直接凝集试验(DAT)在滴度>3200时被确认为VL阳性。40名来自非流行地区且无VL临床体征或症状的DAT阴性个体作为对照。在等温(64°C)条件下,使用一组针对婴儿利什曼原虫动质体DNA(kDNA)微小环基因的六种引物进行LAMP检测。对于巢式PCR,我们使用针对kDNA微小环基因的引物。

结果

LAMP检测在1ml外周血中的检测限为1个寄生虫,在47例DAT确诊的VL病例中的44例中检测到婴儿利什曼原虫DNA,诊断敏感性为93.6%(95%CI)。对照组中未扩增出婴儿利什曼原虫DNA,表明特异性为100%。巢式PCR的敏感性为96%(95%CI),特异性为100%(95%CI)。

结论

LAMP检测结果与巢式PCR相似,但所需时间更短。LAMP方法简单;不需要复杂的设备;反应时间短;并且反应混合物的浊度表明的结果肉眼即可观察到。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2377/4289880/8ce9d3c6b1a8/IJPA-9-50f1.jpg

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