Reddy S V G, Reddy K Thammi, Kumari V Valli, Basha Syed Hussain
a Department of CSE , JNTU Kakinada , Kakinada , Andhra Pradesh 533 003 , India.
b Department of CSE , GIT, GITAM University , Visakhapatnam , Andhra Pradesh 530 045 , India.
J Biomol Struct Dyn. 2015;33(12):2695-709. doi: 10.1080/07391102.2015.1004834. Epub 2015 Feb 11.
Indoleamine 2,3-dioxygenase (IDO) is emerging as an important new therapeutic drug target for the treatment of cancer characterized by pathological immune suppression. IDO catalyzes the rate-limiting step of tryptophan degradation along the kynurenine pathway. Reduction in local tryptophan concentration and the production of immunomodulatory tryptophan metabolites contribute to the immunosuppressive effects of IDO. Presence of IDO on dentritic cells in tumor-draining lymph nodes leading to the activation of T cells toward forming immunosuppressive microenvironment for the survival of tumor cells has confirmed the importance of IDO as a promising novel anticancer immunotherapy drug target. On the other hand, Withaferin A (WA) - active constituent of Withania Somnifera ayurvedic herb has shown to be having a wide range of targeted anticancer properties. In the present study conducted here is an attempt to explore the potential of WA in attenuating IDO for immunotherapeutic tumor arresting activity and to elucidate the underlying mode of action in a computational approach. Our docking and molecular dynamic simulation results predict high binding affinity of the ligand to the receptor with up to -11.51 kcal/mol of energy and 3.63 nM of IC50 value. Further, de novo molecular dynamic simulations predicted stable ligand interactions with critically important residues SER167; ARG231; LYS377, and heme moiety involved in IDO's activity. Conclusively, our results strongly suggest WA as a valuable small ligand molecule with strong binding affinity toward IDO.
吲哚胺2,3-双加氧酶(IDO)正成为治疗以病理性免疫抑制为特征的癌症的重要新型治疗药物靶点。IDO催化色氨酸沿犬尿氨酸途径降解的限速步骤。局部色氨酸浓度的降低以及免疫调节性色氨酸代谢产物的产生有助于IDO的免疫抑制作用。肿瘤引流淋巴结中树突状细胞上IDO的存在导致T细胞活化,从而形成有利于肿瘤细胞存活的免疫抑制微环境,这证实了IDO作为一种有前景的新型抗癌免疫治疗药物靶点的重要性。另一方面,印度人参阿育吠陀草药的活性成分Withaferin A(WA)已显示出具有广泛的靶向抗癌特性。在本研究中,试图探索WA在减弱IDO以实现免疫治疗性肿瘤抑制活性方面的潜力,并以计算方法阐明其潜在的作用模式。我们的对接和分子动力学模拟结果预测,配体与受体具有高结合亲和力,能量高达-11.51 kcal/mol,IC50值为3.63 nM。此外,从头分子动力学模拟预测配体与IDO活性中至关重要的残基SER167、ARG231、LYS377以及血红素部分存在稳定的相互作用。总之,我们的结果强烈表明WA是一种对IDO具有强结合亲和力的有价值的小配体分子。