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猎蝽属海盗猎蝽(半翅目:猎蝽科:海盗猎蝽亚科)的比较线粒体基因组学揭示了黑斑海盗猎蝽、淡褐海盗猎蝽和丑恶海盗猎蝽保守的线粒体基因组组织。

Comparative mitogenomics of the assassin bug genus Peirates (Hemiptera: Reduviidae: Peiratinae) reveal conserved mitochondrial genome organization of P. atromaculatus, P. fulvescens and P. turpis.

作者信息

Zhao Guangyu, Li Hu, Zhao Ping, Cai Wanzhi

机构信息

Department of Entomology, China Agricultural University, Beijing, China; Daxing No.1 Middle School, Beijing, China.

Department of Entomology, China Agricultural University, Beijing, China; Department of Ornamental Horticulture, China Agricultural University, Beijing, China.

出版信息

PLoS One. 2015 Feb 17;10(2):e0117862. doi: 10.1371/journal.pone.0117862. eCollection 2015.

Abstract

In this study, we sequenced four new mitochondrial genomes and presented comparative mitogenomic analyses of five species in the genus Peirates (Hemiptera: Reduviidae). Mitochondrial genomes of these five assassin bugs had a typical set of 37 genes and retained the ancestral gene arrangement of insects. The A+T content, AT- and GC-skews were similar to the common base composition biases of insect mtDNA. Genomic size ranges from 15,702 bp to 16,314 bp and most of the size variation was due to length and copy number of the repeat unit in the putative control region. All of the control region sequences included large tandem repeats present in two or more copies. Our result revealed similarity in mitochondrial genomes of P. atromaculatus, P. fulvescens and P. turpis, as well as the highly conserved genomic-level characteristics of these three species, e.g., the same start and stop codons of protein-coding genes, conserved secondary structure of tRNAs, identical location and length of non-coding and overlapping regions, and conservation of structural elements and tandem repeat unit in control region. Phylogenetic analyses also supported a close relationship between P. atromaculatus, P. fulvescens and P. turpis, which might be recently diverged species. The present study indicates that mitochondrial genome has important implications on phylogenetics, population genetics and speciation in the genus Peirates.

摘要

在本研究中,我们对四个新的线粒体基因组进行了测序,并对刺猎蝽属(半翅目:猎蝽科)的五个物种进行了线粒体基因组比较分析。这五种猎蝽的线粒体基因组具有一套典型的37个基因,并保留了昆虫的祖先基因排列。A+T含量、AT偏斜和GC偏斜与昆虫线粒体DNA常见的碱基组成偏差相似。基因组大小范围为15,702 bp至16,314 bp,大部分大小差异是由于假定控制区域中重复单元的长度和拷贝数不同。所有控制区域序列都包含两个或更多拷贝的大串联重复序列。我们的结果揭示了黑斑刺猎蝽、淡褐刺猎蝽和粗糙刺猎蝽线粒体基因组的相似性,以及这三个物种高度保守的基因组水平特征,例如蛋白质编码基因相同的起始和终止密码子、tRNA的保守二级结构、非编码和重叠区域相同的位置和长度,以及控制区域中结构元件和串联重复单元的保守性。系统发育分析也支持黑斑刺猎蝽、淡褐刺猎蝽和粗糙刺猎蝽之间存在密切关系,它们可能是最近分化的物种。本研究表明线粒体基因组对刺猎蝽属的系统发育、群体遗传学和物种形成具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4e0/4331094/2ef37a493238/pone.0117862.g001.jpg

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