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韩国人群中肝炎的全基因组关联研究。

Genome-wide association study of hepatitis in korean populations.

作者信息

Hong Youngbok, Oh Sejong

机构信息

Department of Nanobiomedical Science, Dankook University, Cheonan 330-714, Korea.

出版信息

Genomics Inform. 2014 Dec;12(4):203-7. doi: 10.5808/GI.2014.12.4.203. Epub 2014 Dec 31.

DOI:10.5808/GI.2014.12.4.203
PMID:25705159
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4330255/
Abstract

Hepatitis is a common and serious disease for the Korean population. It is caused by a virus, the A and B types of which are plentiful in Koreans. In this study, we tried to find genetic factors for hepatitis through genome-wide association studies. We took 368 cases and 1,500 controls from Anseong and Ansan cohort data. About 300,000 single-nucleotide polymorphisms and 20 epidemiological variables were analyzed. We did not find any meaningful significant single nucleotide polymorphisms, but we confirmed the influence of major epidemiological variables on hepatitis.

摘要

肝炎是韩国人群中一种常见且严重的疾病。它由病毒引起,其中甲型和乙型肝炎病毒在韩国人群中十分常见。在本研究中,我们试图通过全基因组关联研究来寻找肝炎的遗传因素。我们从安城和安山队列数据中选取了368例病例和1500例对照。分析了约30万个单核苷酸多态性和20个流行病学变量。我们没有发现任何有意义的显著单核苷酸多态性,但我们证实了主要流行病学变量对肝炎的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ce6/4330255/1087b59853bf/gni-12-203-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ce6/4330255/7020b6953226/gni-12-203-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ce6/4330255/1087b59853bf/gni-12-203-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ce6/4330255/7020b6953226/gni-12-203-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ce6/4330255/1087b59853bf/gni-12-203-g002.jpg

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A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.一项针对亚洲人群的大规模全基因组关联研究揭示了影响八个数量性状的遗传因素。
Nat Genet. 2009 May;41(5):527-34. doi: 10.1038/ng.357. Epub 2009 Apr 26.
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Hepatitis C virus and type 2 diabetes.
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World J Gastroenterol. 2009 Apr 7;15(13):1537-47. doi: 10.3748/wjg.15.1537.
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PLINK: a tool set for whole-genome association and population-based linkage analyses.PLINK:一个用于全基因组关联分析和基于群体的连锁分析的工具集。
Am J Hum Genet. 2007 Sep;81(3):559-75. doi: 10.1086/519795. Epub 2007 Jul 25.