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基于高分辨率X射线衍射数据和周期性计算的ZIF-8电荷密度分布与静电柔性

Charge-density distribution and electrostatic flexibility of ZIF-8 based on high-resolution X-ray diffraction data and periodic calculations.

作者信息

Novaković Sladjana B, Bogdanović Goran A, Heering Christian, Makhloufi Gamall, Francuski Djordje, Janiak Christoph

机构信息

Vinča Institute of Nuclear Sciences, University of Belgrade , P.O. Box 522, 11001 Belgrade, Serbia.

出版信息

Inorg Chem. 2015 Mar 16;54(6):2660-70. doi: 10.1021/ic5028256. Epub 2015 Feb 23.

Abstract

The electron-density distribution in a prototypical porous coordination polymer ZIF-8 has been obtained in an approach combining high-resolution X-ray diffraction data and Invariom refinement. In addition, the periodic quantum-chemical calculation has been used to describe the theoretical density features of ZIF-8 in the same geometry (m1) and also in a "high-pressure" form of ZIF-8 (m2) characterized by conformational change with respect to the methylimidazolate linker. A thorough comparison of the electronic and electrostatic properties in two limiting structural forms of ZIF-8 proposes additional aspects on diffusion and adsorption processes occurring within the framework. The dimensions of the four-membered (FM) and six-membered (SM) apertures of the β cage are reliably determined from the total electron-density distribution. The analysis shows that FM in m2 becomes competitive in size to the SM aperture and should be considered for the diffusion of small molecules and cations. Bader's topological analysis (quantum theory of atoms in molecules) shows similar properties of both ZIF-8 forms. On the other hand, analysis of their electrostatic properties reveals tremendous differences. The study suggests exceptional electrostatic flexibility of the ZIF-8 framework, where small conformational changes lead to a significantly different electrostatic potential (EP) distribution, a feature that could be important for the function and dynamics of the ZIF-8 framework. The cavity surface in m1 contains 38 distinct regions with moderately positive, negative, or neutral EP and weakly positive EP in the cavity volume. In contrast to m1, the m2 form displays only two regions of different EP, with the positive one taking the whole cavity surface and the strong negative one localized entirely in the FM apertures. The EP in the cavity volume is also more positive than that in m1. A pronounced influence of the linker reorientation on the EP of the ZIF-8 forms is related to the high symmetry of the system and to an amplification of the electrostatic properties by cooperative effects of the proximally arranged structural fragments.

摘要

通过结合高分辨率X射线衍射数据和不变量精修的方法,已获得典型多孔配位聚合物ZIF-8中的电子密度分布。此外,周期性量子化学计算已用于描述相同几何结构(m1)以及ZIF-8的“高压”形式(m2)的理论密度特征,m2的特征是相对于甲基咪唑连接体的构象变化。对ZIF-8两种极限结构形式中的电子和静电性质进行全面比较,提出了关于框架内发生的扩散和吸附过程的其他方面。从总电子密度分布可靠地确定了β笼的四元(FM)和六元(SM)孔的尺寸。分析表明,m2中的FM在尺寸上与SM孔具有竞争力,在小分子和阳离子扩散时应予以考虑。巴德拓扑分析(分子中原子的量子理论)表明ZIF-8两种形式具有相似的性质。另一方面,对其静电性质的分析揭示了巨大差异。该研究表明ZIF-8框架具有特殊的静电灵活性,其中小的构象变化会导致明显不同的静电势(EP)分布,这一特征可能对ZIF-8框架的功能和动力学很重要。m1中的腔表面包含38个不同区域,具有适度正、负或中性的EP,腔体积中具有弱正EP。与m1相反,m2形式仅显示两个不同EP的区域,正区域占据整个腔表面,强负区域完全位于FM孔中。腔体积中的EP也比m1中的更正。连接体重排对ZIF-8形式的EP有显著影响,这与系统的高对称性以及近端排列的结构片段的协同效应增强静电性质有关。

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