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梭鲈(鲈形目:鲈科)的完整线粒体基因组

The complete mitochondrial genome of pike-perch, Sander lucioperca (Perciformes: Percidae).

作者信息

Ma Zhihong, Bercsenyi Miklos, Yang Xuefen, Wei Kaijian, Yang Ruibin

机构信息

a Key Lab of Freshwater Animal Breeding certificated by Ministry of Agriculture , College of Fisheries, Huazhong Agricultural University , Wuhan , China .

b Georgikon Faculty , University of Pannonia , Keszthely , Hungary , and.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3135-6. doi: 10.3109/19401736.2015.1007300. Epub 2015 Mar 11.

Abstract

The complete mitochondrial genome of Sander lucioperca has been sequenced and analyzed in this study. It was a circular double-stranded DNA molecule of 16,541 base pairs (bp) in length and exhibited 37 typical animal mitochondrial genes. The gene order and base composition were similar to those of other percid species. All protein-coding genes were initiated with ATG except for COX 1, which began with GTG instead. However, the termination codons of 13 protein-coding genes varied with TAG, TAA, TA or T. Within CR, we detected five copies of 10 bp tandemly repeated sequences domain, which immediately followed the tRNA(Pro). These mitogenome sequence data would contribute to better understanding phylogenetic relationships and population genetics of the family Percidae.

摘要

本研究对鲈鲤的完整线粒体基因组进行了测序和分析。它是一个长度为16541个碱基对(bp)的环状双链DNA分子,含有37个典型的动物线粒体基因。基因顺序和碱基组成与其他鲈科物种相似。除COX 1基因起始密码子为GTG外,所有蛋白质编码基因均以ATG起始。然而,13个蛋白质编码基因的终止密码子有所不同,分别为TAG、TAA、TA或T。在控制区(CR)内,我们检测到5个10 bp串联重复序列结构域的拷贝,它们紧跟在tRNA(Pro)之后。这些线粒体基因组序列数据将有助于更好地理解鲈科的系统发育关系和群体遗传学。

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