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由导致先天性失明的复发性内含子CEP290突变产生的隐蔽外显子的物种依赖性剪接识别。

Species-dependent splice recognition of a cryptic exon resulting from a recurrent intronic CEP290 mutation that causes congenital blindness.

作者信息

Garanto Alejandro, Duijkers Lonneke, Collin Rob W J

机构信息

Department of Human Genetics, Radboud University Medical Center, Geert Grooteplein Zuid 10, 6525 GA Nijmegen, The Netherlands.

Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands.

出版信息

Int J Mol Sci. 2015 Mar 9;16(3):5285-98. doi: 10.3390/ijms16035285.

DOI:10.3390/ijms16035285
PMID:25761237
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4394476/
Abstract

A mutation in intron 26 of CEP290 (c.2991+1655A>G) is the most common genetic cause of Leber congenital amaurosis (LCA), a severe type of inherited retinal degeneration. This mutation creates a cryptic splice donor site, resulting in the insertion of an aberrant exon (exon X) into ~50% of all CEP290 transcripts. A humanized mouse model with this mutation did not recapitulate the aberrant CEP290 splicing observed in LCA patients, suggesting differential recognition of cryptic splice sites between species. To further assess this phenomenon, we generated two CEP290 minigene constructs, with and without the intronic mutation, and transfected these in cell lines of various species. RT-PCR analysis revealed that exon X is well recognized by the splicing machinery in human and non-human primate cell lines. Intriguingly, this recognition decreases in cell lines derived from species such as dog and rodents, and it is completely absent in Drosophila. In addition, other cryptic splicing events corresponding to sequences in intron 26 of CEP290 were observed to varying degrees in the different cell lines. Together, these results highlight the complexity of splice site recognition among different species, and show that care is warranted when generating animal models to mimic splice site mutations in vivo.

摘要

CEP290基因第26内含子的一个突变(c.2991 + 1655A>G)是莱伯先天性黑蒙(LCA)最常见的遗传病因,LCA是一种严重的遗传性视网膜变性。该突变产生了一个隐蔽的剪接供体位点,导致在所有CEP290转录本的约50%中插入一个异常外显子(外显子X)。具有这种突变的人源化小鼠模型并未重现LCA患者中观察到的异常CEP290剪接,这表明不同物种对隐蔽剪接位点的识别存在差异。为了进一步评估这一现象,我们构建了两个CEP290小基因构建体,一个带有内含子突变,一个不带,然后将它们转染到不同物种的细胞系中。逆转录聚合酶链反应(RT-PCR)分析显示,外显子X在人类和非人类灵长类动物细胞系中能被剪接机制很好地识别。有趣的是,在狗和啮齿动物等物种来源的细胞系中,这种识别能力下降,而在果蝇细胞系中则完全不存在。此外,在不同细胞系中还不同程度地观察到了与CEP290第26内含子序列相对应的其他隐蔽剪接事件。总之,这些结果凸显了不同物种间剪接位点识别的复杂性,并表明在构建动物模型以模拟体内剪接位点突变时需谨慎行事。

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1
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Cell Mol Life Sci. 2014 Nov;71(22):4347-60. doi: 10.1007/s00018-014-1688-y. Epub 2014 Jul 27.
2
Genetic spectrum of autosomal recessive non-syndromic hearing loss in Pakistani families.巴基斯坦家庭常染色体隐性非综合征性听力损失的基因谱
PLoS One. 2014 Jun 20;9(6):e100146. doi: 10.1371/journal.pone.0100146. eCollection 2014.
3
Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity.
预测的剪接变异 c.11+5G>A 以细胞特异性方式导致 mRNA 表达减少。
Cells. 2022 Nov 17;11(22):3640. doi: 10.3390/cells11223640.
4
Considerations for Generating Humanized Mouse Models to Test Efficacy of Antisense Oligonucleotides.生成用于测试反义寡核苷酸疗效的人源化小鼠模型的考虑因素。
Methods Mol Biol. 2022;2434:267-279. doi: 10.1007/978-1-0716-2010-6_18.
5
Exon Skipping Through Chimeric Antisense snRNAs to Correct Retinitis Pigmentosa GTPase-Regulator () Splice Defect.通过嵌合反义 snRNA 外显子跳跃纠正视网膜色素变性 GTP 酶调节剂 () 剪接缺陷。
Nucleic Acid Ther. 2022 Aug;32(4):333-349. doi: 10.1089/nat.2021.0053. Epub 2022 Feb 14.
6
Delivery of oligonucleotide-based therapeutics: challenges and opportunities.寡核苷酸类治疗药物的递送:挑战与机遇。
EMBO Mol Med. 2021 Apr 9;13(4):e13243. doi: 10.15252/emmm.202013243. Epub 2021 Apr 6.
7
Improving Translation by Identifying Evidence for More Human-Relevant Preclinical Strategies.通过识别更具人体相关性的临床前策略的证据来改进翻译。
Animals (Basel). 2020 Jul 10;10(7):1170. doi: 10.3390/ani10071170.
8
The Scope for Thalassemia Gene Therapy by Disruption of Aberrant Regulatory Elements.通过破坏异常调控元件进行地中海贫血基因治疗的前景
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9
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10
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对差异转录本覆盖度进行校正后发现,可变剪接与生物体复杂性之间存在密切关系。
Mol Biol Evol. 2014 Jun;31(6):1402-13. doi: 10.1093/molbev/msu083. Epub 2014 Mar 27.
4
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5
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6
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7
Alternative splicing and retinal degeneration.选择性剪接与视网膜变性。
Clin Genet. 2013 Aug;84(2):142-9. doi: 10.1111/cge.12181. Epub 2013 Jun 5.
8
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Hum Mol Genet. 2013 Jul 15;22(14):2785-94. doi: 10.1093/hmg/ddt126. Epub 2013 Mar 20.
9
Pick one, but be quick: 5' splice sites and the problems of too many choices.选一个,但要快:5' 剪接位点和选择过多的问题。
Genes Dev. 2013 Jan 15;27(2):129-44. doi: 10.1101/gad.209759.112.
10
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Mol Ther Nucleic Acids. 2012 Jun 26;1(6):e29. doi: 10.1038/mtna.2012.21.