Wu Chang-wen, Zhao Xian-liang, Wu Xiao-jun, Wen Chao, Li Hui, Chen Xin-hua, Peng Xuan-xian
Center for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, MOE Key Lab Aquatic Food Safety, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou 510006, People's Republic of China.
Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, Daxue Road 184, Xiamen 361005, People's Republic of China.
FEMS Microbiol Lett. 2015 Apr;362(8):fnv040. doi: 10.1093/femsle/fnv040. Epub 2015 Mar 10.
PcPAF is a novel antifungal protein identified by our recent study, which is produced by a fungal strain Penicillium citrinum W1 isolated from a south-west Indian Ocean sediment sample. The present study identified glycine as a potential metabolite which increased the fungal growth and promoted antifungal activity. Then, GC/MS based metabolomics was used to disclose the metabolic mechanism manipulated by glycine. With the aid of unsupervised hierarchical clustering analysis and supervised orthogonal partial least-squares-discriminant analysis, the intracellular metabolite profiles were distinguished among two glycine-treated groups and control. 43 and 47 significantly varied metabolites were detected in 2.5 mM or 5 mM glycine-treated groups and involved in seven and eight pathways, respectively. Furthermore, exogenous serine, which is converted from glycine, showed the same potential as glycine did. Our findings not only identify glycine and serine as nutrients which promoted P. citrinum W1 growth and increased antifungal activity, but also highlight the way to utilize metabolomics for an understanding of metabolic mechanism manipulated by an exogenous compound.
PcPAF是我们最近的研究所鉴定出的一种新型抗真菌蛋白,它由从印度洋西南部沉积物样本中分离出的一株桔青霉W1产生。本研究确定甘氨酸是一种潜在的代谢产物,它能促进真菌生长并增强抗真菌活性。然后,基于气相色谱/质谱联用的代谢组学技术被用于揭示甘氨酸所操控的代谢机制。借助无监督层次聚类分析和有监督的正交偏最小二乘判别分析,区分了两个甘氨酸处理组和对照组的细胞内代谢物谱。在2.5 mM或5 mM甘氨酸处理组中分别检测到43种和47种显著变化的代谢物,它们分别涉及七条和八条代谢途径。此外,由甘氨酸转化而来的外源性丝氨酸显示出与甘氨酸相同的潜能。我们的研究结果不仅确定了甘氨酸和丝氨酸是促进桔青霉W1生长并增强抗真菌活性的营养物质,还突出了利用代谢组学来理解外源性化合物所操控的代谢机制的方法。