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西北大西洋和南部非洲的大白鲨(噬人鲨)的遗传多样性

Genetic Diversity of White Sharks, Carcharodon carcharias, in the Northwest Atlantic and Southern Africa.

作者信息

O'Leary Shannon J, Feldheim Kevin A, Fields Andrew T, Natanson Lisa J, Wintner Sabine, Hussey Nigel, Shivji Mahmood S, Chapman Demian D

机构信息

From the School of Marine and Atmospheric Science, Stony Brook University, Stony Brook, NY 11394 (O'Leary, Fields, and Chapman); the Pritzker Laboratory for Molecular Systematics and Evolution, The Field Museum, Chicago, IL 60605 (Feldheim); the National Marine Fisheries Service, Apex Predators Program, Narragansett, RI 02882 (Natanson); the KwaZulu-Natal Sharks Board and Biomedical Resource Unit, University of KwaZulu-Natal, Durban 4000, South Africa (Wintner); the Great Lakes Institute for Environmental Research University of Windsor, Windsor, Ontario N9B3P4, Canada (Hussey); the Save our Seas Shark Center and Guy Harvey Research Institute, Nova Southeastern University, FL 33004 (Shivji); and the Institute of Ocean Conservation Science, Stony Brook, NY 11794 (Chapman). shannon.O'

From the School of Marine and Atmospheric Science, Stony Brook University, Stony Brook, NY 11394 (O'Leary, Fields, and Chapman); the Pritzker Laboratory for Molecular Systematics and Evolution, The Field Museum, Chicago, IL 60605 (Feldheim); the National Marine Fisheries Service, Apex Predators Program, Narragansett, RI 02882 (Natanson); the KwaZulu-Natal Sharks Board and Biomedical Resource Unit, University of KwaZulu-Natal, Durban 4000, South Africa (Wintner); the Great Lakes Institute for Environmental Research University of Windsor, Windsor, Ontario N9B3P4, Canada (Hussey); the Save our Seas Shark Center and Guy Harvey Research Institute, Nova Southeastern University, FL 33004 (Shivji); and the Institute of Ocean Conservation Science, Stony Brook, NY 11794 (Chapman).

出版信息

J Hered. 2015 May-Jun;106(3):258-65. doi: 10.1093/jhered/esv001. Epub 2015 Mar 10.

Abstract

The white shark, Carcharodon carcharias, is both one of the largest apex predators in the world and among the most heavily protected marine fish. Population genetic diversity is in part shaped by recent demographic history and can thus provide information complementary to more traditional population assessments, which are difficult to obtain for white sharks and have at times been controversial. Here, we use the mitochondrial control region and 14 nuclear-encoded microsatellite loci to assess white shark genetic diversity in 2 regions: the Northwest Atlantic (NWA, N = 35) and southern Africa (SA, N = 131). We find that these 2 regions harbor genetically distinct white shark populations (Φ ST = 0.10, P < 0.00001; microsatellite F ST = 0.1057, P < 0.021). M-ratios were low and indicative of a genetic bottleneck in the NWA (M-ratio = 0.71, P < 0.004) but not SA (M-ratio = 0.85, P = 0.39). This is consistent with other evidence showing a steep population decline occurring in the mid to late 20th century in the NWA, whereas the SA population appears to have been relatively stable. Estimates of effective population size ranged from 22.6 to 66.3 (NWA) and 188 to 1998.3 (SA) and evidence of inbreeding was found (primarily in NWA). Overall, our findings indicate that white population dynamics within NWA and SA are determined more by intrinsic reproduction than immigration and there is genetic evidence of a population decline in the NWA, further justifying the strong domestic protective measures that have been taken for this species in this region. Our study also highlights how assessment of genetic diversity can complement other sources of information to better understand the status of threatened marine fish populations.

摘要

大白鲨(Carcharodon carcharias)既是世界上最大的顶级掠食者之一,也是受到最严格保护的海洋鱼类之一。种群遗传多样性部分由近期的种群历史所塑造,因此可以提供与更传统的种群评估互补的信息,而传统的种群评估对于大白鲨来说很难获得,并且有时存在争议。在这里,我们使用线粒体控制区和14个核编码微卫星位点来评估两个区域的大白鲨遗传多样性:西北大西洋(NWA,N = 35)和南部非洲(SA,N = 131)。我们发现这两个区域拥有遗传上不同的大白鲨种群(ΦST = 0.10,P < 0.00001;微卫星FST = 0.1057,P < 0.021)。M比率较低,表明西北大西洋存在遗传瓶颈(M比率 = 0.71,P < 0.004),而南部非洲则没有(M比率 = 0.85,P = 0.39)。这与其他证据一致,表明20世纪中叶至后期西北大西洋的种群数量急剧下降,而南部非洲的种群数量似乎相对稳定。有效种群大小的估计范围为22.6至66.3(西北大西洋)和188至1998.3(南部非洲),并且发现了近亲繁殖的证据(主要在西北大西洋)。总体而言,我们的研究结果表明,西北大西洋和南部非洲的大白鲨种群动态更多地由内在繁殖而非移民决定,并且有遗传证据表明西北大西洋的种群数量在下降,这进一步证明了该地区对该物种采取的强有力的国内保护措施是合理的。我们的研究还强调了遗传多样性评估如何能够补充其他信息来源,以更好地了解受威胁海洋鱼类种群的状况。

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