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一条大西洋白鲨的线粒体基因组()。

Mitochondrial genome of an Atlantic white shark ().

作者信息

Marra Nicholas J, Wang Minghui, Sun Qi, Pavinski Bitar Paulina D, Stanhope Michael J, Shivji Mahmood S

机构信息

Department of Population Medicine and Diagnostic Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.

Save Our Seas Shark Research Center and Guy Harvey Research Institute, Nova Southeastern University, Dania Beach, FL, USA.

出版信息

Mitochondrial DNA B Resour. 2016 Nov 22;1(1):717-719. doi: 10.1080/23802359.2016.1222248.

DOI:10.1080/23802359.2016.1222248
PMID:33473604
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7799651/
Abstract

Here we report the first full mitochondrial genome sequence for a white shark caught in the Atlantic Ocean. The mitochondrial genome is 16,745 bp in length and contains 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a non-coding control region. The base composition of this mtDNA lineage is A: 30.7%, C: 26.9%, G: 13.8%, and T: 28.6%. In concordance with previous population genetic studies, the Atlantic caught individual forms a separate lineage from individuals caught on either side of the Pacific Ocean.

摘要

在此,我们报告了一条在大西洋捕获的大白鲨的首个完整线粒体基因组序列。该线粒体基因组长度为16,745碱基对,包含13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和一个非编码控制区。该线粒体DNA谱系的碱基组成为:A:30.7%,C:26.9%,G:13.8%,T:28.6%。与之前的种群遗传学研究一致,在大西洋捕获的个体与在太平洋两侧捕获的个体形成了一个单独的谱系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7fef/7799651/9320d98cd9cd/TMDN_A_1222248_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7fef/7799651/9320d98cd9cd/TMDN_A_1222248_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7fef/7799651/9320d98cd9cd/TMDN_A_1222248_F0001_B.jpg

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本文引用的文献

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J Hered. 2015 May-Jun;106(3):258-65. doi: 10.1093/jhered/esv001. Epub 2015 Mar 10.
2
Mitogenomics of the Speartooth Shark challenges ten years of control region sequencing.尖齿鲨的有丝分裂基因组学对十年的控制区测序提出了挑战。
BMC Evol Biol. 2014 Nov 19;14:232. doi: 10.1186/s12862-014-0232-x.
3
The complete mitochondrial DNA of white shark (Carcharodon carcharias) from Isla Guadalupe, Mexico.
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1281-2. doi: 10.3109/19401736.2014.945556. Epub 2014 Aug 14.
4
Characterization of the heart transcriptome of the white shark (Carcharodon carcharias).对大白鲨(Carcharodon carcharias)心脏转录组的特征描述。
BMC Genomics. 2013 Oct 11;14:697. doi: 10.1186/1471-2164-14-697.
5
The complete mitochondrial genome of the great white shark, Carcharodon carcharias (Chondrichthyes, Lamnidae).大白鲨(噬人鲨属,鼠鲨科,软骨鱼纲)的完整线粒体基因组。
Mitochondrial DNA. 2014 Oct;25(5):357-8. doi: 10.3109/19401736.2013.803092. Epub 2013 Jul 10.
6
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
7
Fast gapped-read alignment with Bowtie 2.快速缺口读对准与 Bowtie 2。
Nat Methods. 2012 Mar 4;9(4):357-9. doi: 10.1038/nmeth.1923.
8
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MUSCLE: multiple sequence alignment with high accuracy and high throughput.MUSCLE:具有高精度和高吞吐量的多序列比对。
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