Pessi Igor S, Osorio-Forero César, Gálvez Eric J C, Simões Felipe L, Simões Jefferson C, Junca Howard, Macedo Alexandre J
Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Avenida Bento Gonçalves, 9500 - Agronomia, Porto Alegre - RS, 91501-970, Brazil.
Research Group Microbial Ecology: Metabolism, Genomics and Evolution of Communities of Environmental Microorganisms, CorpoGen, Carrera 5 66A-34, 110231, Bogotá, DC, Colombia.
FEMS Microbiol Ecol. 2015 Jan;91(1):1-10. doi: 10.1093/femsec/fiu005. Epub 2014 Dec 5.
Several studies have shown that microbial communities in Antarctic environments are highly diverse. However, considering that the Antarctic Peninsula is among the regions with the fastest warming rates, and that regional climate change has been linked to an increase in the mean rate of glacier retreat, the microbial diversity in Antarctic soil is still poorly understood. In this study, we analysed more than 40 000 sequences of the V5-V6 hypervariable region of the 16S rRNA gene obtained by 454 pyrosequencing from four soil samples from the Wanda Glacier forefield, King George Island, Antarctic Peninsula. Phylotype diversity and richness were surprisingly high, and taxonomic assignment of sequences revealed that communities are dominated by Proteobacteria, Bacteroidetes and Euryarchaeota, with a high frequency of archaeal and bacterial phylotypes unclassified at the genus level and without cultured representative strains, representing a distinct microbial community signature. Several phylotypes were related to marine microorganisms, indicating the importance of the marine environment as a source of colonizers for this recently deglaciated environment. Finally, dominant phylotypes were related to different microorganisms possessing a large array of metabolic strategies, indicating that early successional communities in Antarctic glacier forefield can be also functionally diverse.
多项研究表明,南极环境中的微生物群落具有高度多样性。然而,考虑到南极半岛是升温速度最快的地区之一,且区域气候变化与冰川平均退缩速率的增加有关,南极土壤中的微生物多样性仍知之甚少。在本研究中,我们分析了通过454焦磷酸测序从南极半岛乔治王岛万达冰川前缘的四个土壤样本中获得的超过40000条16S rRNA基因V5 - V6高变区序列。系统发育型多样性和丰富度出奇地高,序列的分类学分析表明,群落主要由变形菌门、拟杆菌门和广古菌门主导,有高频率的古菌和细菌系统发育型在属水平上未分类且没有培养的代表性菌株,代表了独特的微生物群落特征。一些系统发育型与海洋微生物有关,表明海洋环境作为这个最近冰川消退环境的定居者来源的重要性。最后,优势系统发育型与具有大量代谢策略的不同微生物有关,表明南极冰川前缘的早期演替群落也可能在功能上具有多样性。