Noeske Jonas, Wasserman Michael R, Terry Daniel S, Altman Roger B, Blanchard Scott C, Cate Jamie H D
1] Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California, USA. [2] Department of Chemistry, University of California, Berkeley, Berkeley, California, USA.
Department of Physiology and Biophysics, Weill Cornell Medical College, New York, New York, USA.
Nat Struct Mol Biol. 2015 Apr;22(4):336-41. doi: 10.1038/nsmb.2994. Epub 2015 Mar 16.
Protein synthesis by the ribosome is highly dependent on the ionic conditions in the cellular environment, but the roles of ribosome solvation have remained poorly understood. Moreover, the functions of modifications to ribosomal RNA and ribosomal proteins have also been unclear. Here we present the structure of the Escherichia coli 70S ribosome at 2.4-Å resolution. The structure reveals details of the ribosomal subunit interface that are conserved in all domains of life, and it suggests how solvation contributes to ribosome integrity and function as well as how the conformation of ribosomal protein uS12 aids in mRNA decoding. This structure helps to explain the phylogenetic conservation of key elements of the ribosome, including post-transcriptional and post-translational modifications, and should serve as a basis for future antibiotic development.
核糖体的蛋白质合成高度依赖于细胞环境中的离子条件,但核糖体溶剂化的作用仍知之甚少。此外,核糖体RNA和核糖体蛋白修饰的功能也尚不明确。在此,我们展示了分辨率为2.4埃的大肠杆菌70S核糖体的结构。该结构揭示了在所有生命域中保守的核糖体亚基界面细节,并表明溶剂化如何有助于核糖体的完整性和功能,以及核糖体蛋白uS12的构象如何辅助mRNA解码。这一结构有助于解释核糖体关键元件的系统发育保守性,包括转录后和翻译后修饰,并应为未来的抗生素开发奠定基础。