从联苯污染土壤中分离出的多氯联苯降解细菌罗尔斯通氏菌（Cupriavidus basilensis）KF708（NBRC 110671）的基因组序列草图
Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Cupriavidus basilensis KF708 (NBRC 110671) Isolated from Biphenyl-Contaminated Soil.
作者信息
Suenaga Hikaru, Yamazoe Atsushi, Hosoyama Akira, Kimura Nobutada, Hirose Jun, Watanabe Takahito, Fujihara Hidehiko, Futagami Taiki, Goto Masatoshi, Furukawa Kensuke
机构信息
Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan
Biological Resource Center, National Institute of Technology and Evaluation (NITE), Tokyo, Japan.
出版信息
Genome Announc. 2015 Mar 19;3(2):e00143-15. doi: 10.1128/genomeA.00143-15.
Abstract
We report the draft genome sequence of Cupriavidus basilensis KF708 (NBRC 110671), which utilizes biphenyl as a sole carbon source and degrades polychlorinated biphenyls (PCBs). The KF708 strain possesses genes for biphenyl catabolism and other genes involved in various aromatic compounds.
摘要
我们报告了以联苯作为唯一碳源并能降解多氯联苯（PCBs）的巴西贪铜菌KF708（NBRC 110671）的基因组序列草图。KF708菌株拥有联苯分解代谢基因以及参与各种芳香族化合物代谢的其他基因。
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本文引用的文献
1
Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader.
J Bacteriol. 2012 Dec;194(24):6970-1. doi: 10.1128/JB.01848-12.
2
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.
BMC Bioinformatics. 2008 Sep 19;9:386. doi: 10.1186/1471-2105-9-386.
3
Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes.
J Bacteriol. 1986 May;166(2):392-8. doi: 10.1128/jb.166.2.392-398.1986.
4
Molecular relationship of chromosomal genes encoding biphenyl/polychlorinated biphenyl catabolism: some soil bacteria possess a highly conserved bph operon.
J Bacteriol. 1989 Oct;171(10):5467-72. doi: 10.1128/jb.171.10.5467-5472.1989.
5
Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707.
J Biol Chem. 1992 Mar 5;267(7):4844-53.
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