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脂质膜中肽折叠的动力学

Kinetics of peptide folding in lipid membranes.

作者信息

Oh Kwang-Im, Smith-Dupont Kathryn B, Markiewicz Beatrice N, Gai Feng

机构信息

Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104.

Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.

出版信息

Biopolymers. 2015 Jul;104(4):281-90. doi: 10.1002/bip.22640.

DOI:10.1002/bip.22640
PMID:25808575
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4516651/
Abstract

Despite our extensive understanding of water-soluble protein folding kinetics, much less is known about the folding dynamics and mechanisms of membrane proteins. However, recent studies have shown that for relatively simple systems, such as peptides that form a transmembrane α-helix, helical dimer, or helix-turn-helix, it is possible to assess the kinetics of several important steps, including peptide binding to the membrane from aqueous solution, peptide folding on the membrane surface, helix insertion into the membrane, and helix-helix association inside the membrane. Herein, we provide a brief review of these studies and also suggest new initiation and probing methods that could lead to improved temporal and structural resolution in future experiments.

摘要

尽管我们对水溶性蛋白质折叠动力学有广泛的了解,但对膜蛋白的折叠动力学和机制了解得要少得多。然而,最近的研究表明,对于相对简单的系统,如形成跨膜α螺旋、螺旋二聚体或螺旋-转角-螺旋的肽,有可能评估几个重要步骤的动力学,包括肽从水溶液与膜结合、肽在膜表面折叠、螺旋插入膜以及膜内螺旋-螺旋缔合。在此,我们简要回顾这些研究,并提出新的起始和探测方法,这些方法可能会在未来的实验中提高时间和结构分辨率。

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本文引用的文献

1
Tightening up the structure, lighting up the pathway: Application of molecular constraints and light to manipulate protein folding, self-assembly and function.强化结构,照亮途径:应用分子限制和光来操控蛋白质折叠、自组装及功能。
Sci China Chem. 2014 Dec;57(12):1615-1624. doi: 10.1007/s11426-014-5225-5.
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Bacteriorhodopsin folds through a poorly organized transition state.细菌视紫红质通过一个组织不佳的过渡态进行折叠。
J Am Chem Soc. 2014 Nov 26;136(47):16574-81. doi: 10.1021/ja508359n. Epub 2014 Nov 17.
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pHLIP-FIRE, a cell insertion-triggered fluorescent probe for imaging tumors demonstrates targeted cargo delivery in vivo.
pHLIP-FIRE是一种用于肿瘤成像的细胞插入触发荧光探针,可在体内实现靶向性货物递送。
ACS Chem Biol. 2014 Nov 21;9(11):2545-53. doi: 10.1021/cb500388m. Epub 2014 Sep 10.
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Peripheral and integral membrane binding of peptides characterized by time-dependent fluorescence shifts: focus on antimicrobial peptide LAH₄.通过时间依赖性荧光位移表征的肽的外周和整合膜结合:聚焦于抗菌肽LAH₄。
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Ester carbonyl vibration as a sensitive probe of protein local electric field.酯羰基振动作为蛋白质局部电场的敏感探针。
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6
Outer membrane β-barrel protein folding is physically controlled by periplasmic lipid head groups and BamA.外膜 β-桶状蛋白折叠在物理上受周质脂头部基团和 BamA 的控制。
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Targeting diseased tissues by pHLIP insertion at low cell surface pH.通过在低细胞表面pH值下插入pHLIP靶向病变组织。
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Fast protein folding kinetics.快速蛋白质折叠动力学
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The binding mechanisms of intrinsically disordered proteins.无定形蛋白质的结合机制。
Phys Chem Chem Phys. 2014 Apr 14;16(14):6323-31. doi: 10.1039/c3cp54226b. Epub 2013 Dec 6.
10
Wild-type and mutant hemagglutinin fusion peptides alter bilayer structure as well as kinetics and activation thermodynamics of stalk and pore formation differently: mechanistic implications.野生型和突变型血凝素融合肽以不同的方式改变双层结构以及茎和孔形成的动力学和激活热力学:机制意义。
Biophys J. 2013 Dec 3;105(11):2495-506. doi: 10.1016/j.bpj.2013.10.010.