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关于理解平流层溴物种的分解/异构化通道:从头算和量子拓扑研究

Towards understanding the decomposition/isomerism channels of stratospheric bromine species: ab initio and quantum topology study.

作者信息

Aziz Saadullah G, Alyoubi Abdulrahman O, Elroby Shaaban A, Osman Osman I, Hilal Rifaat H

机构信息

Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah B.O. 208203, Saudi Arabia.

Chemistry Department, Faculty of Science, Beni Suef University, Beni Suef 6251, Egypt.

出版信息

Int J Mol Sci. 2015 Mar 25;16(4):6783-800. doi: 10.3390/ijms16046783.

Abstract

The present study aims at a fundamental understanding of bonding characteristics of the C-Br and O-Br bonds. The target molecular systems are the isomeric CH3OBr/BrCH2OH system and their decomposition products. Calculations of geometries and frequencies at different density functional theory (DFT) and Hartree-Fock/Møller-Plesset (HF/MP2) levels have been performed. Results have been assessed and evaluated against those obtained at the coupled cluster single-double (Triplet) (CCSD(T)) level of theory. The characteristics of the C-Br and O-Br bonds have been identified via analysis of the electrostatic potential, natural bond orbital (NBO), and quantum theory of atoms in molecules (QTAIM). Analysis of the electrostatic potential (ESP) maps enabled the quantitative characterization of the Br σ-holes. Its magnitude seems very sensitive to the environment and the charge accumulated in the adjacent centers. Some quantum topological parameters, namely Ñ2ρ, ellipticity at bond critical points and the Laplacian bond order, were computed and discussed. The potential energy function for internal rotation has been computed and Fourier transformed to characterize the conformational preferences and origin of the barriers. NBO energetic components for rotation about the C-Br and O-Br bonds as a function of torsion angle have been computed and displayed.

摘要

本研究旨在从根本上理解C-Br键和O-Br键的键合特性。目标分子体系是同分异构体CH3OBr/BrCH2OH体系及其分解产物。已在不同的密度泛函理论(DFT)和Hartree-Fock/Møller-Plesset(HF/MP2)水平上进行了几何结构和频率计算。已根据在耦合簇单双(三重态)(CCSD(T))理论水平上获得的结果对结果进行了评估。通过对静电势、自然键轨道(NBO)和分子中原子的量子理论(QTAIM)的分析,确定了C-Br键和O-Br键的特性。对静电势(ESP)图的分析实现了对Br σ-空穴的定量表征。其大小似乎对环境和相邻中心积累的电荷非常敏感。计算并讨论了一些量子拓扑参数,即Ñ2ρ、键临界点处的椭圆率和拉普拉斯键序。计算了内旋转的势能函数并进行了傅里叶变换,以表征构象偏好和势垒的起源。计算并显示了围绕C-Br键和O-Br键旋转的NBO能量成分随扭转角的变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81db/4424987/7e063ad43b73/ijms-16-06783-g002.jpg

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