Raissi Shabari Akbar, Pourayoubi Mehrdad, Marandi Pari, Dušek Michal, Eigner Václav
Faculty of Chemistry, North Tehran Branch, Islamic Azad University, Tehran, Iran.
Department of Chemistry, Faculty of Sciences, Ferdowsi University of Mashhad, Mashhad, Iran.
Acta Crystallogr C Struct Chem. 2015 Apr;71(Pt 4):338-43. doi: 10.1107/S2053229615004453. Epub 2015 Mar 31.
The structure of N,N',N''-tribenzylphosphorothioic triamide, C21H24N3PS, (I), and analysis of the bond-angle sums at the N atoms for this compound, and for 74 structures with a P(S)[N]3 skeleton and the N atom in a three-coordinate geometry found in the Cambridge Structural Database [CSD; Groom & Allen (2014). Angew. Chem. Int. Ed. 53, 662-671], are reported. For (I), the bond-angle sum at one of the N atoms [359 (1)°] shows a nearly planar configuration, while the other two show a nonplanar geometry with bond-angle sums of 342 (1) and 347 (1)°. The location of the atoms attached to the nonplanar N atoms suggests an anti orientation of the corresponding lone electron pairs (LEPs) on these N atoms with respect to the P=S group. For 74 structures with a P(S)[N]3 skeleton and with the N atom in a three-coordinate geometry, the bond-angle sums at the N atoms were found to be in the range 293-360°. Among 307 such three-coordinate N atoms, 39% (120 N atoms) have bond-angle sums in the range 359-360°, in accordance with sp(2) hybridization, and 45% (138 N atoms) have bond-angle sums in the range 352-359°, with hybridization close to sp(2). For the orientation of the LEP with respect to the P=S group, the anti orientation was found to be a general rule for N atoms, with the corresponding bond-angle sums deviating by more than 8° from the planar value of 360°. In the title structure, the S atom takes part in intermolecular (N-H···)(N-H···)S hydrogen bonds, connecting the molecules into extended chains parallel to the b axis. The co-operation of one N atom in an N-H···S hydrogen bond as an H-atom donor, and in an N-H···N hydrogen bond as an acceptor, is a novel feature of the crystal structure.
报道了N,N',N''-三苄基硫代磷酰胺(C21H24N3PS,(I))的结构,以及对该化合物中N原子处键角总和的分析,还分析了剑桥结构数据库[CSD;Groom & Allen (2014). Angew. Chem. Int. Ed. 53, 662 - 671]中74个具有P(S)[N]3骨架且N原子呈三配位几何构型的结构。对于(I),其中一个N原子处的键角总和[359 (1)°]显示出近乎平面的构型,而另外两个显示出非平面几何构型,键角总和分别为342 (1)°和347 (1)°。连接到非平面N原子上的原子的位置表明这些N原子上相应的孤对电子(LEP)相对于P=S基团呈反式取向。对于74个具有P(S)[N]3骨架且N原子呈三配位几何构型的结构,发现N原子处的键角总和在293 - 360°范围内。在307个这样的三配位N原子中,39%(120个N原子)的键角总和在359 - 360°范围内,符合sp(2)杂化,45%(138个N原子)的键角总和在352 - 359°范围内,杂化接近sp(2)。对于LEP相对于P=S基团的取向,发现反式取向是N原子的一般规律,相应的键角总和与平面值360°的偏差超过8°。在标题结构中,S原子参与分子间(N - H···)(N - H···)S氢键,将分子连接成平行于b轴的延伸链。一个N原子在N - H···S氢键中作为H原子供体,在N - H···N氢键中作为受体,这是晶体结构的一个新特征。