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[俄罗斯人群中认知特征遗传标记与阿尔茨海默病的复制关联分析]

[Replicative association analysis of genetic markers of cognitive traits with Alzheimer's disease in a Russian population].

作者信息

Stepanov V A, Bocharova A V, Marusin A V, Zhukova N G, Alifirova V M, Zhukova I A

出版信息

Mol Biol (Mosk). 2014 Nov-Dec;48(6):952-62.

Abstract

Replicative association analysis of Alzheimer's disease (AD) with 15 genetic markers associated with cognitive traits in genome-wide association studies was performed. In a Russian populations associations of rs2616984 in CSMD1 gene with AD (OR = 1.50, 95% CI = 1.07-2.09, p-value = 0.018) and putative associations with the disease of rs3131296 in NOTCH4 gene (OR = 1.53, 95% CI = 0.98-2.39, p-value = 0.06) and rs2229741 of NRIP1 gene (OR = 1.35, CI = 0.99-1.85, p-value = 0.061) were revealed. Combinations of epistatic interacting genes (CSMD1 and NRIP1; NOTCH4, CSMD1 and NRIP1; TLR4, CSMD1 and NRIP1) were found, as well as their genotypes combinations significantly associated with AD and characterized by highest predictive values. Probable molecular mechanisms implicated in the relation of genes under study to AD pathogenesis are discussed. Bioinformatic analysis of biological processes, molecular functions and protein-protein interactions of BA genes demonstrated that genes under study may play modulating and modifying role by participation in various regulatory and signal pathways involved in a disease development.

摘要

对阿尔茨海默病(AD)与全基因组关联研究中15个与认知特征相关的基因标记进行了复制关联分析。在俄罗斯人群中,发现CSMD1基因中的rs2616984与AD存在关联(OR = 1.50,95% CI = 1.07 - 2.09,p值 = 0.018),NOTCH4基因中的rs3131296与该疾病存在假定关联(OR = 1.53,95% CI = 0.98 - 2.39,p值 = 0.06),NRIP1基因的rs2229741也与该疾病存在假定关联(OR = 1.35,CI = 0.99 - 1.85,p值 = 0.061)。发现了上位性相互作用基因的组合(CSMD1和NRIP1;NOTCH4、CSMD1和NRIP1;TLR4、CSMD1和NRIP1),以及它们与AD显著相关且具有最高预测价值的基因型组合。讨论了所研究基因与AD发病机制关系中可能涉及的分子机制。对BA基因的生物学过程、分子功能和蛋白质 - 蛋白质相互作用的生物信息学分析表明,所研究的基因可能通过参与疾病发展过程中的各种调节和信号通路发挥调节和修饰作用。

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