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通过形态学和分子学方法揭示西北地中海裸甲藻目(甲藻纲)的多样性和系统发育

Diversity and Phylogeny of Gymnodiniales (Dinophyceae) from the NW Mediterranean Sea Revealed by a Morphological and Molecular Approach.

作者信息

Reñé Albert, Camp Jordi, Garcés Esther

机构信息

Institut de Ciències del Mar (CSIC) Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona (Spain).

Institut de Ciències del Mar (CSIC) Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona (Spain).

出版信息

Protist. 2015 May;166(2):234-63. doi: 10.1016/j.protis.2015.03.001. Epub 2015 Mar 12.

Abstract

The diversity and phylogeny of dinoflagellates belonging to the Gymnodiniales were studied during a 3-year period at several coastal stations along the Catalan coast (NW Mediterranean) by combining analyses of their morphological features with rDNA sequencing. This approach resulted in the detection of 59 different morphospecies, 13 of which were observed for the first time in the Mediterranean Sea. Fifteen of the detected species were HAB producers; four represented novel detections on the Catalan coast and two in the Mediterranean Sea. Partial rDNA sequences were obtained for 50 different morphospecies, including novel LSU rDNA sequences for 27 species, highlighting the current scarcity of molecular information for this group of dinoflagellates. The combination of morphology and genetics allowed the first determinations of the phylogenetic position of several genera, i.e., Torodinium and many Gyrodinium and Warnowiacean species. The results also suggested that among the specimens belonging to the genera Gymnodinium, Apicoporus, and Cochlodinium were those representing as yet undescribed species. Furthermore, the phylogenetic data suggested taxonomic incongruences for some species, i.e., Gyrodinium undulans and Gymnodinium agaricoides. Although a species complex related to G. spirale was detected, the partial LSU rDNA sequences lacked sufficient resolution to discriminate between various other Gyrodinium morphospecies.

摘要

在三年时间里,通过结合形态特征分析与rDNA测序,对加泰罗尼亚海岸(地中海西北部)几个沿海站点的裸甲藻目甲藻的多样性和系统发育进行了研究。这种方法检测到了59种不同的形态物种,其中13种是在地中海首次观察到的。检测到的物种中有15种是有害藻华的生产者;4种是在加泰罗尼亚海岸新发现的,2种是在地中海新发现的。获得了50种不同形态物种的部分rDNA序列,包括27个物种的新的 LSU rDNA序列,突出了这组甲藻目前分子信息的稀缺性。形态学和遗传学的结合首次确定了几个属的系统发育位置,即Torodinium以及许多裸甲藻属和角藻科物种。结果还表明,在属于裸甲藻属、顶孔藻属和旋沟藻属的标本中,有一些代表尚未描述的物种。此外,系统发育数据表明一些物种存在分类不一致,即波动裸甲藻和木耳状裸甲藻。虽然检测到了一个与螺旋裸甲藻相关的物种复合体,但部分LSU rDNA序列缺乏足够的分辨率来区分其他各种裸甲藻形态物种。

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